RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 PTCHD1Q96NR3 888 aa16.98■□□□□ 0.31
CHD3-214ENST00000572579 LPAR4Q99677 370 aa16.98■□□□□ 0.31
CHD3-214ENST00000572579 CDCP1Q9H5V8 836 aa16.98■□□□□ 0.31
CHD3-214ENST00000572579 KLHL1Q9NR64 748 aa16.98■□□□□ 0.31
CHD3-214ENST00000572579 GRHL1Q9NZI5 618 aa16.98■□□□□ 0.31
CHD3-214ENST00000572579 KCNE2Q9Y6J6 123 aa16.98■□□□□ 0.31
CHD3-214ENST00000572579 MYO7BQ6PIF6 2116 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 FBN2P35556 2912 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 CREBBPQ92793 2442 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 MYO9AB2RTY4 2548 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 A0A1B0GUH1 482 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 TCRBV16S1A1N1A0A5B0 115 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 GABRR3A8MPY1 467 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 TGFBR3LH3BV60 316 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 PRMT3O60678 531 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 CRYABP02511 175 aaKnown RBP16.97■□□□□ 0.31
CHD3-214ENST00000572579 UQCRHP07919 91 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 SERPINA6P08185 405 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 GRNP28799 593 aaKnown RBP16.97■□□□□ 0.31
CHD3-214ENST00000572579 HNRNPH1P31943 449 aaKnown RBP16.97■□□□□ 0.31
CHD3-214ENST00000572579 TRADDQ15628 312 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 MEP1AQ16819 746 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 TOR1AIP1Q5JTV8 583 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 RNFT1Q5M7Z0 435 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 QSOX2Q6ZRP7 698 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 CHERPQ8IWX8 916 aaKnown RBP16.97■□□□□ 0.31
CHD3-214ENST00000572579 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.97■□□□□ 0.31
CHD3-214ENST00000572579 TMEM52Q8NDY8 209 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 ITLN2Q8WWU7 325 aaPredicted RBP16.97■□□□□ 0.31
CHD3-214ENST00000572579 ESAMQ96AP7 390 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 AIF1LQ9BQI0 150 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 TMEM79Q9BSE2 394 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 CTNNAL1Q9UBT7 734 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 SEC14L3Q9UDX4 400 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 DYRK1BQ9Y463 629 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 ASB1Q9Y576 335 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 PCDHGB6Q9Y5F9 930 aa16.97■□□□□ 0.31
CHD3-214ENST00000572579 A0A0G2JN53 185 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 ASPDHA6ND91 283 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 NCF1BA6NI72 391 aaPredicted RBP16.96■□□□□ 0.31
CHD3-214ENST00000572579 A8MUA0 341 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 NCF1CA8MVU1 366 aaPredicted RBP16.96■□□□□ 0.31
CHD3-214ENST00000572579 PHGDHO43175 533 aaKnown RBP16.96■□□□□ 0.31
CHD3-214ENST00000572579 C1GALT1C1LP0DN25 315 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 NCF1P14598 390 aaPredicted RBP16.96■□□□□ 0.31
CHD3-214ENST00000572579 EPORP19235 508 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 TPP2P29144 1249 aaPredicted RBP16.96■□□□□ 0.31
CHD3-214ENST00000572579 PPP2R1BP30154 601 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 HNRNPFP52597 415 aaKnown RBP16.96■□□□□ 0.31
CHD3-214ENST00000572579 GPX6P59796 221 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 BTN3A2P78410 334 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 TGFBIQ15582 683 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 OR4D1Q15615 310 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 SP5Q6BEB4 398 aaPredicted RBP16.96■□□□□ 0.31
CHD3-214ENST00000572579 ABHD13Q7L211 337 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 RPS19BP1Q86WX3 136 aaKnown RBP16.96■□□□□ 0.31
CHD3-214ENST00000572579 SIAH3Q8IW03 269 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 TRPV3Q8NET8 790 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 MS4A6EQ96DS6 147 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 CCDC120Q96HB5 630 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 QRFPRQ96P65 431 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 TSPAN10Q9H1Z9 355 aaPredicted RBP16.96■□□□□ 0.31
CHD3-214ENST00000572579 DPH5Q9H2P9 285 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 RHBGQ9H310 441 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 GPAMQ9HCL2 828 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 COPG2Q9UBF2 871 aa16.96■□□□□ 0.31
CHD3-214ENST00000572579 ZNF490Q9ULM2 529 aaPredicted RBP16.96■□□□□ 0.31
CHD3-214ENST00000572579 TRGV8A0A0C4DH27 118 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 LRIT2A6NDA9 550 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 RAD51CO43502 376 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 WDR47O94967 919 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 CD22P20273 847 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 GGT5P36269 586 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 CA7P43166 264 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 HNMTP50135 292 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 MLF1P58340 268 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 SLBPQ14493 270 aaKnown RBP eCLIP16.95■□□□□ 0.3
CHD3-214ENST00000572579 CDSNQ15517 529 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 CYP4X1Q8N118 509 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 SUN3Q8TAQ9 357 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 FRMD6Q96NE9 622 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 EGFL8Q99944 293 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 UTP23Q9BRU9 249 aaKnown RBP16.95■□□□□ 0.3
CHD3-214ENST00000572579 ERP44Q9BS26 406 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 DERL2Q9GZP9 239 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 TRIM45Q9H8W5 580 aaPredicted RBP16.95■□□□□ 0.3
CHD3-214ENST00000572579 CLK4Q9HAZ1 481 aaKnown RBP16.95■□□□□ 0.3
CHD3-214ENST00000572579 SAYSD1Q9NPB0 183 aa16.95■□□□□ 0.3
CHD3-214ENST00000572579 ZNF223Q9UK11 482 aaPredicted RBP16.95■□□□□ 0.3
CHD3-214ENST00000572579 TCRBV9S1A1TA0A576 114 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 PABPN1LA6NDY0 278 aaKnown RBP16.94■□□□□ 0.3
CHD3-214ENST00000572579 SAGE2PA6NJ88 616 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 FAM159BA6NKW6 160 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 NDC80O14777 642 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 FAM155BO75949 473 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 SP1P08047 785 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 RNH1P13489 461 aaKnown RBP16.94■□□□□ 0.3
CHD3-214ENST00000572579 CD1DP15813 335 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 JAK1P23458 1154 aa16.94■□□□□ 0.3
CHD3-214ENST00000572579 PAFAH1B1P43034 410 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms