RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 MT-CO3P00414 261 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 TFP02787 698 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 ATP5BP06576 529 aaKnown RBP6.88□□□□□ -1.31
CNOT1-222ENST00000570139 TNFRSF1AP19438 455 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 PTGER1P34995 402 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 ADRA1AP35348 466 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 GP5P40197 560 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 BUD31P41223 144 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-222ENST00000570139 CSKP41240 450 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 CD86P42081 329 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 SERPINB9P50453 376 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 SERPINH1P50454 418 aaKnown RBP6.88□□□□□ -1.31
CNOT1-222ENST00000570139 SGSHP51688 502 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 RPL26P61254 145 aaKnown RBP6.88□□□□□ -1.31
CNOT1-222ENST00000570139 NTHL1P78549 312 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 RHAGQ02094 409 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 RAD51Q06609 339 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 SNTB1Q13884 538 aaKnown RBP6.88□□□□□ -1.31
CNOT1-222ENST00000570139 PCGF3Q3KNV8 242 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 TIGD2Q4W5G0 525 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 ARL13AQ5H913 290 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-222ENST00000570139 KRBOX4Q5JUW0 171 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 PCID2Q5JVF3 399 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 KIAA0895LQ68EN5 471 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 CASC4Q6P4E1 433 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 KDELC1Q6UW63 502 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 RANBP10Q6VN20 620 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 DCDC5Q6ZRR9 648 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 TMEM135Q86UB9 458 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 LRRC6Q86X45 466 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 LMNTD2Q8IXW0 634 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 MINDY1Q8N5J2 469 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 EXD3Q8N9H8 876 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 KDM1BQ8NB78 822 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 SYT8Q8NBV8 401 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 GDAP1Q8TB36 358 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 TMEM170AQ8WVE7 144 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 FGF13Q92913 245 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 WBP2Q969T9 261 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 FAM162AQ96A26 154 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 ELSPBP1Q96BH3 223 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 MOAP1Q96BY2 351 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 MTBPQ96DY7 904 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 OXNAD1Q96HP4 312 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-222ENST00000570139 DGAT2Q96PD7 388 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 SEMA3CQ99985 751 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 CIPCQ9C0C6 399 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 CNOT10Q9H9A5 744 aaKnown RBP6.88□□□□□ -1.31
CNOT1-222ENST00000570139 PARPBPQ9NWS1 579 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 DUS2Q9NX74 493 aaKnown RBP6.88□□□□□ -1.31
CNOT1-222ENST00000570139 PLK2Q9NYY3 685 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 HACD3Q9P035 362 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 ANAPC2Q9UJX6 822 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 GGA2Q9UJY4 613 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 RPL26L1Q9UNX3 145 aaKnown RBP6.88□□□□□ -1.31
CNOT1-222ENST00000570139 ICKQ9UPZ9 632 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 CHMP2BQ9UQN3 213 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 CCL26Q9Y258 94 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 HS3ST2Q9Y278 367 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 MAD1L1Q9Y6D9 718 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.88□□□□□ -1.31
CNOT1-222ENST00000570139 CHD7Q9P2D1 2997 aa6.88□□□□□ -1.31
CNOT1-222ENST00000570139 TNRC18O15417 2968 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-222ENST00000570139 IQANK1A0A1B0GTG1 560 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 LOC285095A0A1B0GVY8 99 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 TCRBV9S1A1TA0A576 114 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 TRBC2A0A5B9 178 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 NEDD8-MDP1E9PL57 170 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 SLC7A4O43246 635 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 PRICKLE3O43900 615 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-222ENST00000570139 ECI2O75521 394 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 TPPPO94811 219 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 TMCC1O94876 653 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 GSRP00390 522 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 SHBGP04278 402 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 EBLN1P0CF75 366 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 CPT2P23786 658 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 PNLIPRP2P54317 469 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 ARSFP54793 590 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 GPX6P59796 221 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 RHOAP61586 193 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 SNRPD1P62314 119 aaKnown RBP6.87□□□□□ -1.31
CNOT1-222ENST00000570139 BLOC1S1P78537 153 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 ARF5P84085 180 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 ACSM2AQ08AH3 577 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 FCHO2Q0JRZ9 810 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 DNAJC3Q13217 504 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 FGFBP1Q14512 234 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 FASTKD3Q14CZ7 662 aaKnown RBP6.87□□□□□ -1.31
CNOT1-222ENST00000570139 SLC1A5Q15758 541 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 UGP2Q16851 508 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 FSCBQ5H9T9 825 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 AARS2Q5JTZ9 985 aaKnown RBP6.87□□□□□ -1.31
CNOT1-222ENST00000570139 FAM78AQ5JUQ0 283 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 ABHD17BQ5VST6 288 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 ACSM2BQ68CK6 577 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 PDPK2PQ6A1A2 396 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 TMEM65Q6PI78 240 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 SYCE2Q6PIF2 218 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 TPGS1Q6ZTW0 290 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms