RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 TSPAN10Q9H1Z9 355 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 NECTIN3Q9NQS3 549 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 KLHL1Q9NR64 748 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 C19orf25Q9UFG5 118 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 CELSR1Q9NYQ6 3014 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 AKAP9Q99996 3911 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 A0A0G2JN53 185 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 GABRR3A8MPY1 467 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 CXorf49A8MYA2 514 aaPredicted RBP12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 RAD51CO43502 376 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 HNRNPH1P31943 449 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 GRK3P35626 688 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 AHRP35869 848 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 SLC6A12P48065 614 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 HNRNPFP52597 415 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 OR4D2P58180 307 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 PDIA2Q13087 525 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 CBLBQ13191 982 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 CSHL1Q14406 222 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 OR1C1Q15619 314 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 EXT1Q16394 746 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 FBXO48Q5FWF7 155 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 CAPN12Q6ZSI9 719 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 ZNF572Q7Z3I7 529 aaPredicted RBP12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 VN1R5Q7Z5H4 357 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 SIAH3Q8IW03 269 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.98□□□□□ -0.336e-7■■■■■ 139.2
GTF3C1-211ENST00000569653 CA13Q8N1Q1 262 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 SPATA6LQ8N4H0 392 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 TMEM52Q8NDY8 209 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 ZNF354BQ96LW1 612 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 FRMD6Q96NE9 622 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 LPAR4Q99677 370 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 ERP44Q9BS26 406 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 TMEM79Q9BSE2 394 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 FAM129AQ9BZQ8 928 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 PELI2Q9HAT8 420 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 ZFATQ9P243 1243 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 SEC14L3Q9UDX4 400 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 SNX24Q9Y343 169 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 ZNF407Q9C0G0 2248 aa12.98□□□□□ -0.33
GTF3C1-211ENST00000569653 TRGV8A0A0C4DH27 118 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 A0A1B0GUH1 482 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 TCRBV16S1A1N1A0A5B0 115 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 ARHGAP10A1A4S6 786 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 ASPDHA6ND91 283 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 TAPBPO15533 448 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 PPP2R1BP30154 601 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 CA7P43166 264 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 PER3P56645 1201 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 AP2B1P63010 937 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 RUNX2Q13950 521 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 C3AR1Q16581 482 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 MEP1AQ16819 746 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 TOR1AIP1Q5JTV8 583 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 SLCO4C1Q6ZQN7 724 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 NCCRP1Q6ZVX7 275 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 FGD2Q7Z6J4 655 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 KLHDC8AQ8IYD2 350 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 DNAJB8Q8NHS0 232 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 ATL1Q8WXF7 558 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 RHBDF1Q96CC6 855 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 VPS39Q96JC1 886 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 PTCHD1Q96NR3 888 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 RAB17Q9H0T7 212 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 DPH5Q9H2P9 285 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 CAB39LQ9H9S4 337 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 WHRNQ9P202 907 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 TEKT2Q9UIF3 430 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 SH3BGRL2Q9UJC5 107 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 ZNF223Q9UK11 482 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 MTO1Q9Y2Z2 717 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 UTP11Q9Y3A2 253 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 OARD1Q9Y530 152 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 ASB1Q9Y576 335 aa12.97□□□□□ -0.33
GTF3C1-211ENST00000569653 A8MUA0 341 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 CRYABP02511 175 aaKnown RBP12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 EPORP19235 508 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 CD22P20273 847 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 IL10P22301 178 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 TPP2P29144 1249 aaPredicted RBP12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 SSTR1P30872 391 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 ADORA2A-AS1P86434 159 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 CDKL1Q00532 357 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 ACTN3Q08043 901 aaPredicted RBP12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 RGS1Q08116 209 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 RBBP5Q15291 538 aaKnown RBP12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 OR4D1Q15615 310 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 QSOX2Q6ZRP7 698 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 GALNTL5Q7Z4T8 443 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 CYP4X1Q8N118 509 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 ANKRD7Q92527 254 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 ZNF592Q92610 1267 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 MARVELD3Q96A59 401 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 ESAMQ96AP7 390 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 QRFPRQ96P65 431 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 UTP23Q9BRU9 249 aaKnown RBP12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 TRIM54Q9BYV2 358 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 RHBGQ9H310 441 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 RHOJQ9H4E5 214 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms