RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SNRNP35Q16560 246 aaKnown RBP4.04□□□□□ -1.76
LINC00561-201ENST00000565815 DNAL1Q4LDG9 190 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 LGSNQ5TDP6 509 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 DEF8Q6ZN54 512 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 MON1BQ7L1V2 547 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 OTUD6AQ7L8S5 288 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 PALB2Q86YC2 1186 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 DAW1Q8N136 415 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 MGARPQ8TDB4 240 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 FGF14Q92915 247 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 SMARCD2Q92925 531 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 STMN2Q93045 179 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 NSL1Q96IY1 281 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 ZFYVE19Q96K21 471 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 NLRP4Q96MN2 994 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 OLFM3Q96PB7 478 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 TBC1D10AQ9BXI6 508 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 NUSAP1Q9BXS6 441 aaKnown RBP4.04□□□□□ -1.76
LINC00561-201ENST00000565815 FAM124BQ9H5Z6 455 aaPredicted RBP4.04□□□□□ -1.76
LINC00561-201ENST00000565815 DDX43Q9NXZ2 648 aaKnown RBP4.04□□□□□ -1.76
LINC00561-201ENST00000565815 ADAM28Q9UKQ2 775 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 CHKBQ9Y259 395 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 MTF2Q9Y483 593 aaPredicted RBP4.04□□□□□ -1.76
LINC00561-201ENST00000565815 OTOGLQ3ZCN5 2332 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 WDR81Q562E7 1941 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 TMEM202A6NGA9 273 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 E7ESA3 106 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 PLPP2O43688 288 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 FKBP6O75344 327 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 TADA2AO75478 443 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 BEST1O76090 585 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 VTNP04004 478 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 CDK4P11802 303 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 CA4P22748 312 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 FOXN2P32314 431 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 PIK3CAP42336 1068 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 OR1G1P47890 313 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 PSMC5P62195 406 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 YWHAEP62258 255 aaKnown RBP4.04□□□□□ -1.76
LINC00561-201ENST00000565815 BNC1Q01954 994 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 CYP24A1Q07973 514 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 AP1B1Q10567 949 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 DMP1Q13316 513 aaPredicted RBP4.04□□□□□ -1.76
LINC00561-201ENST00000565815 TFDP1Q14186 410 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 PSMD6Q15008 389 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 TRMT5Q32P41 509 aaKnown RBP4.04□□□□□ -1.76
LINC00561-201ENST00000565815 Q5PR19 223 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 MANEAQ5SRI9 462 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 NLRP9Q7RTR0 991 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 GSTA5Q7RTV2 222 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 NET1Q7Z628 596 aaPredicted RBP4.04□□□□□ -1.76
LINC00561-201ENST00000565815 PHLDB2Q86SQ0 1253 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 GPD1LQ8N335 351 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 GDAP1Q8TB36 358 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 C1orf54Q8WWF1 131 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 LZICQ8WZA0 190 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 ZNF75CPQ92670 426 aaPredicted RBP4.04□□□□□ -1.76
LINC00561-201ENST00000565815 SLC29A3Q9BZD2 475 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 MIS12Q9H081 205 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 C1orf21Q9H246 121 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 VCX3AQ9NNX9 186 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 MARCH5Q9NX47 278 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 PIN4Q9Y237 131 aaKnown RBP4.04□□□□□ -1.76
LINC00561-201ENST00000565815 HS3ST3B1Q9Y662 390 aa4.04□□□□□ -1.76
LINC00561-201ENST00000565815 ZFHX2Q9C0A1 2572 aaPredicted RBP4.04□□□□□ -1.76
LINC00561-201ENST00000565815 DOCK8Q8NF50 2099 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 IGLV5-39A0A0G2JS06 123 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 MYO1GB0I1T2 1018 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 CIB2O75838 187 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 APBB3O95704 486 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 PIGRP01833 764 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 KRT7P08729 469 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 LINGO3P0C6S8 592 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 RALAP11233 206 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 RAD52P43351 418 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 GPR12P47775 334 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 KCNJ1P48048 391 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 CCNHP51946 323 aaPredicted RBP4.03□□□□□ -1.76
LINC00561-201ENST00000565815 MRPS21P82921 87 aaKnown RBP4.03□□□□□ -1.76
LINC00561-201ENST00000565815 CDK16Q00536 496 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 TRAF3Q13114 568 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 PSMD5Q16401 504 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 SETMARQ53H47 684 aaPredicted RBP4.03□□□□□ -1.76
LINC00561-201ENST00000565815 STXBP5Q5T5C0 1151 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 RNASEH2BQ5TBB1 312 aaKnown RBP4.03□□□□□ -1.76
LINC00561-201ENST00000565815 NOTUMQ6P988 496 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 TECPR1Q7Z6L1 1165 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 SLC47A2Q86VL8 602 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 KIF2BQ8N4N8 673 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 HDDC3Q8N4P3 179 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 TEX45Q8NA69 505 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 C16orf52Q8NHV5 167 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 SLC35F5Q8WV83 523 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 RHBDF1Q96CC6 855 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 LRRC39Q96DD0 335 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 MTBPQ96DY7 904 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 PAFAH2Q99487 392 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 SUDS3Q9H7L9 328 aaPredicted RBP4.03□□□□□ -1.76
LINC00561-201ENST00000565815 PLAC1Q9HBJ0 212 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 NDRG2Q9UN36 371 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms