RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 DUSP12Q9UNI6 340 aa15.67■□□□□ 0.1
LINC00554-201ENST00000564841 A0A075B6Q4 140 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.66■□□□□ 0.1
LINC00554-201ENST00000564841 KLK8O60259 260 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 OAZ2O95190 189 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 KDELR2P33947 212 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 OR1D2P34982 312 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 RGRP47804 291 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 ZNF33AQ06730 810 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 USP39Q53GS9 565 aaKnown RBP15.66■□□□□ 0.1
LINC00554-201ENST00000564841 TIGD7Q6NT04 549 aaPredicted RBP15.66■□□□□ 0.1
LINC00554-201ENST00000564841 BCDIN3DQ7Z5W3 292 aaKnown RBP15.66■□□□□ 0.1
LINC00554-201ENST00000564841 GTPBP3Q969Y2 492 aaKnown RBP15.66■□□□□ 0.1
LINC00554-201ENST00000564841 UPRTQ96BW1 309 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 IL4I1Q96RQ9 567 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 C1QTNF3Q9BXJ4 246 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 MARCH5Q9NX47 278 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 SCN5AQ14524 2016 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 PDPK1O15530 556 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 PLOD3O60568 738 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 IL6P05231 212 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 ACPPP15309 386 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 SEMG2Q02383 582 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 TLE2Q04725 743 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 CCDC85BQ15834 202 aaPredicted RBP15.66■□□□□ 0.1
LINC00554-201ENST00000564841 GLYR1Q49A26 553 aaPredicted RBP15.66■□□□□ 0.1
LINC00554-201ENST00000564841 MPPE1Q53F39 396 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 MANEALQ5VSG8 457 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 CREB3L2Q70SY1 520 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 ZNF767PQ75MW2 155 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 RNF130Q86XS8 419 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 RNF175Q8N4F7 328 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 C3orf14Q9HBI5 128 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 CMAHPQ9Y471 501 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 PCDHGC4Q9Y5F7 938 aa15.66■□□□□ 0.1
LINC00554-201ENST00000564841 NUPL2O15504 423 aaKnown RBP15.65■□□□□ 0.1
LINC00554-201ENST00000564841 AP2A2O94973 939 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 IGLV3-25P01717 112 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 C9P02748 559 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 IRF1P10914 325 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 SRCP12931 536 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 POU1F1P28069 291 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 S100A3P33764 101 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 HNRNPA0Q13151 305 aaKnown RBP15.65■□□□□ 0.1
LINC00554-201ENST00000564841 FBXO43Q4G163 708 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 TMIGD1Q6UXZ0 262 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 MBOAT1Q6ZNC8 495 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 TSEN54Q7Z6J9 526 aaKnown RBP15.65■□□□□ 0.1
LINC00554-201ENST00000564841 MON1AQ86VX9 555 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 OR6C4Q8NGE1 309 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 CD200R1Q8TD46 325 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 ZBED6CLQ96FA7 236 aaPredicted RBP15.65■□□□□ 0.1
LINC00554-201ENST00000564841 IMPAD1Q9NX62 359 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 ELOVL2Q9NXB9 296 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 MARCH2Q9P0N8 246 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 NUP50Q9UKX7 468 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 YARS2Q9Y2Z4 477 aaKnown RBP15.65■□□□□ 0.1
LINC00554-201ENST00000564841 STX7O15400 261 aaKnown RBP15.65■□□□□ 0.1
LINC00554-201ENST00000564841 GALTP07902 379 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 RORCP51449 518 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 CRYBA2P53672 197 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 IL2P60568 153 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 MFSD13AQ14CX5 517 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 IQCCQ4KMZ1 466 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 KIAA1324Q6UXG2 1013 aaKnown RBP15.65■□□□□ 0.1
LINC00554-201ENST00000564841 DENND1CQ8IV53 801 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 TOE1Q96GM8 510 aaKnown RBP15.65■□□□□ 0.1
LINC00554-201ENST00000564841 TMEM80Q96HE8 168 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 RAD9AQ99638 391 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 AIFM2Q9BRQ8 373 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 APOL5Q9BWW9 433 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 LRTM1Q9HBL6 345 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 PRDM5Q9NQX1 630 aaPredicted RBP15.65■□□□□ 0.1
LINC00554-201ENST00000564841 MAN2B2Q9Y2E5 1009 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 MTMR11A4FU01 709 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 RFXAPO00287 272 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 RFXANKO14593 260 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 FGF10O15520 208 aaPredicted RBP15.65■□□□□ 0.1
LINC00554-201ENST00000564841 FABP7O15540 132 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 SLC22A5O76082 557 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 KCNK5O95279 499 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 ENGP17813 658 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 FEN1P39748 380 aaKnown RBP15.65■□□□□ 0.1
LINC00554-201ENST00000564841 GNPDA1P46926 289 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 ZNF235Q14590 738 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 LARS2Q15031 903 aaKnown RBP15.65■□□□□ 0.1
LINC00554-201ENST00000564841 P2RY14Q15391 338 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 CPSF6Q16630 551 aaKnown RBP eCLIP15.65■□□□□ 0.1
LINC00554-201ENST00000564841 CTSL3PQ5NE16 218 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 ZBTB37Q5TC79 503 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 ZNF621Q6ZSS3 439 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 PHC2Q8IXK0 858 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 TMEM132CQ8N3T6 1108 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 SYT14Q8NB59 555 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 PPP3R2Q96LZ3 170 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 SPATA9Q9BWV2 254 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 PLCXD1Q9NUJ7 323 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 CHD7Q9P2D1 2997 aa15.65■□□□□ 0.1
LINC00554-201ENST00000564841 FADS2P1A8MWK0 482 aa15.64■□□□□ 0.09
LINC00554-201ENST00000564841 GTPBP1O00178 669 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms