RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 SLC3A1Q07837 685 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 LASP1Q14847 261 aaKnown RBP4.07□□□□□ -1.76
LINC00560-201ENST00000564593 TAB1Q15750 504 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 MAPK11Q15759 364 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 TMEM30BQ3MIR4 351 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 ADAMTSL4-AS1Q5T5F5 129 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 ATP1A1-AS1Q5TC04 95 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 SLC27A4Q6P1M0 643 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 C15orf52Q6ZUT6 534 aaKnown RBP4.07□□□□□ -1.76
LINC00560-201ENST00000564593 TRMT11Q7Z4G4 463 aaKnown RBP4.07□□□□□ -1.76
LINC00560-201ENST00000564593 PRSS42Q7Z5A4 293 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 TMEM126BQ8IUX1 230 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 SFRP1Q8N474 314 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 SEPT8Q92599 483 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 ATP6V0A1Q93050 837 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 WBP2Q969T9 261 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 MTIF3Q9H2K0 278 aaKnown RBP4.07□□□□□ -1.76
LINC00560-201ENST00000564593 DBNDD1Q9H9R9 158 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 PNPLA3Q9NST1 481 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 KNSTRNQ9Y448 316 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 CCDC162PA2VCL2 907 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 C15orf61A6NNL5 157 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 ZNF732B4DXR9 585 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 RTCAO00442 366 aaKnown RBP4.06□□□□□ -1.76
LINC00560-201ENST00000564593 LINC01565O15544 149 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 MLNRO43193 412 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 IGLV1-44P01699 117 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 P4HA1P13674 534 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 ZNF26P17031 533 aaPredicted RBP4.06□□□□□ -1.76
LINC00560-201ENST00000564593 ATP6V1E1P36543 226 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 SLC1A3P43003 542 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 ARF5P84085 180 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 GRB14Q14449 540 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 LRRC37A5PQ49AS3 106 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 C17orf107Q6ZR85 190 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 CHMP1BQ7LBR1 199 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 NOTCH2NLQ7Z3S9 236 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 ZNF329Q86UD4 541 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 LAX1Q8IWV1 398 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 THEM5Q8N1Q8 247 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 CCDC185Q8N715 623 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 OR5T2Q8NGG2 359 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 OR4D10Q8NGI6 311 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 GGHQ92820 318 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 CASP10Q92851 521 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 FAM46BQ96A09 425 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 OMA1Q96E52 524 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 CFAP36Q96G28 342 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 EPSTI1Q96J88 318 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 FGF22Q9HCT0 170 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 MAD2L2Q9UI95 211 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 SOGA1O94964 1423 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 KIF27Q86VH2 1401 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 C5orf51A6NDU8 294 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 NR5A2O00482 541 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 MAGEB2O15479 319 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 CLN5O75503 358 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 NXPH2O95156 264 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 CTNNA2P26232 953 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 HLA-FP30511 346 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 SMSP52788 366 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 UCP2P55851 309 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 CBX3Q13185 183 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 TMEM187Q14656 261 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 HLA-BQ31612 363 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 FAM106AQ4KMX7 169 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 TCEAL6Q6IPX3 200 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 CNTN4Q8IWV2 1026 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 TEX26Q8N6G2 289 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 RNF149Q8NC42 400 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 ZNF248Q8NDW4 579 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 RBM4Q9BWF3 364 aaKnown RBP4.06□□□□□ -1.76
LINC00560-201ENST00000564593 DGCR6LQ9BY27 220 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 MAGEF1Q9HAY2 307 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 SCRT2Q9NQ03 307 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 DNAJC11Q9NVH1 559 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 COMMD8Q9NX08 183 aa4.06□□□□□ -1.76
LINC00560-201ENST00000564593 DBF4Q9UBU7 674 aaPredicted RBP4.06□□□□□ -1.76
LINC00560-201ENST00000564593 CNTNAP2Q9UHC6 1331 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 KIF21AQ7Z4S6 1674 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 A0A087X002 238 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 CLDN1O95832 211 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 OLFM2O95897 454 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 GAS8O95995 478 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 IGHEP01854 428 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 THEGLP0DJG4 465 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 OPRL1P41146 370 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 TSFMP43897 325 aaKnown RBP4.05□□□□□ -1.76
LINC00560-201ENST00000564593 SLC6A12P48065 614 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 CLCN4P51793 760 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 BTG1P62324 171 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 LCP2Q13094 533 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 CEACAM7Q14002 265 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 STXBP2Q15833 593 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 ZFP69Q49AA0 526 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 WLSQ5T9L3 541 aa4.05□□□□□ -1.76
LINC00560-201ENST00000564593 ALKBH5Q6P6C2 394 aaKnown RBP4.05□□□□□ -1.76
LINC00560-201ENST00000564593 ZNF444Q8N0Y2 327 aaPredicted RBP4.05□□□□□ -1.76
LINC00560-201ENST00000564593 CLEC1AQ8NC01 280 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms