RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 PRUNE1Q86TP1 453 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 PRPF39Q86UA1 669 aaKnown RBP2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 HSCBQ8IWL3 235 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 APCDD1Q8J025 514 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 PRSS35Q8N3Z0 413 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 CCDC185Q8N715 623 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 PI4KAP1Q8N8J0 262 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 EXT2Q93063 718 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 B3GALT6Q96L58 329 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 CHMP4AQ9BY43 222 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 FN3KQ9H479 309 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 FNDC4Q9H6D8 234 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 WDR41Q9HAD4 459 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 KCNK13Q9HB14 408 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 IARS2Q9NSE4 1012 aaKnown RBP2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 DEPPQ9NTK1 212 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 WDR35Q9P2L0 1181 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 NSG2Q9Y328 171 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 POGZQ7Z3K3 1410 aa2.39□□□□□ -2.03
HMGB1P33-201ENST00000563485 A0A1W2PPW3 197 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 LMO7DNF2Z398 122 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 SH3BP5O60239 455 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 PRAF2O60831 178 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 OR6B1O95007 311 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 CRYBA2P53672 197 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 PPIAP62937 165 aaKnown RBP2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 MZT1Q08AG7 82 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 CAPRIN1Q14444 709 aaKnown RBP2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 MAPRE1Q15691 268 aaKnown RBP2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 POM121L1PQ3SYA9 428 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 LBHQ53QV2 105 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 ZNF542PQ5EBM4 170 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 UTF1Q5T230 341 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 LINC00242Q5T6M2 205 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 OLFML2AQ68BL7 652 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 MACC1Q6ZN28 852 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 Q71RC1 249 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 COX8CQ7Z4L0 72 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 NRARPQ7Z6K4 114 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 BADQ92934 168 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 MGME1Q9BQP7 344 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 TEX13BQ9BXU2 312 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 SLC39A8Q9C0K1 460 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 AGTPBP1Q9UPW5 1226 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 SATB2Q9UPW6 733 aa2.38□□□□□ -2.03
HMGB1P33-201ENST00000563485 TCP10L2B9ZVM9 353 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 MLNRO43193 412 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 ZNF253O75346 499 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 KRT6AP02538 564 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 KRT6BP04259 564 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 HCKP08631 526 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 GIG44P09565 113 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 MYBL1P10243 752 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 TCF4P15884 667 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 GOT1P17174 413 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 CTNNA2P26232 953 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 SSTR1P30872 391 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 HSPA4P34932 840 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 KRT6CP48668 564 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 RGS7P49802 495 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 EVCP57679 992 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 IL10RBQ08334 325 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 GRB14Q14449 540 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 ZNF79Q15937 498 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 TAZQ16635 292 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 LRRC37A5PQ49AS3 106 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 MUC21Q5SSG8 566 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 TEX35Q5T0J7 233 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 RAPH1Q70E73 1250 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 LRRC49Q8IUZ0 686 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 FAM219AQ8IW50 185 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 PGAP3Q96FM1 320 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 CFAP57Q96MR6 1250 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 RUNDC3BQ96NL0 473 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 TNFRSF13CQ96RJ3 184 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 PCDHB18PQ96TA0 734 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 ALKBH7Q9BT30 221 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 KATNB1Q9BVA0 655 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 PNNQ9H307 717 aaKnown RBP2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 IKZF3Q9UKT9 509 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 SPATA2Q9UM82 520 aa2.37□□□□□ -2.03
HMGB1P33-201ENST00000563485 TRBV5-4A0A0C4DH59 114 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 URADA6NGE7 173 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 FAM220BPB1ANY3 271 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 PRSS46E5RG02 174 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 LUC7L3O95232 432 aaKnown RBP2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 IGHG1P01857 330 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 C9P02748 559 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 FYNP06241 537 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 ADRB2P07550 413 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 HLCSP50747 726 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 MFAP3P55082 362 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 IGLV3-21P80748 117 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 ECSCRQ19T08 205 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 TIMM50Q3ZCQ8 353 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 ZRANB3Q5FWF4 1079 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 CST9LP1Q5W188 147 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 TMEM64Q6YI46 380 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 CROCCP3Q8IVE0 287 aa2.36□□□□□ -2.03
HMGB1P33-201ENST00000563485 BANPQ8N9N5 519 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms