RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ASCL3Q9NQ33 180 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 MAGEL2Q9UJ55 1249 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 CD207Q9UJ71 328 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 TCFL5Q9UL49 500 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 PKP3Q9Y446 797 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 FADS3Q9Y5Q0 445 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 ERBINQ96RT1 1412 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.57□□□□□ -1.68
SMG1-207ENST00000563235 E5RJQ4 531 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 UPP2O95045 317 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 GSTA2P09210 222 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 PSKH1P11801 424 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 IL7RP16871 459 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 MSH3P20585 1137 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 S1PR1P21453 382 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 UBA1P22314 1058 aaKnown RBP4.57□□□□□ -1.68
SMG1-207ENST00000563235 HSD11B1P28845 292 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 SERPINB1P30740 379 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 FEN1P39748 380 aaKnown RBP4.57□□□□□ -1.68
SMG1-207ENST00000563235 PBX1P40424 430 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 TMPOP42166 694 aaKnown RBP4.57□□□□□ -1.68
SMG1-207ENST00000563235 HNRNPMP52272 730 aaKnown RBP eCLIP4.57□□□□□ -1.68
SMG1-207ENST00000563235 TSPAN31Q12999 210 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 NFYCQ13952 458 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 SELPLGQ14242 412 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 RAB39AQ14964 217 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 EZH2Q15910 746 aaKnown RBP4.57□□□□□ -1.68
SMG1-207ENST00000563235 TBRG1Q3YBR2 411 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 CBWD6Q4V339 395 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 SLC25A53Q5H9E4 307 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 CBWD3Q5JTY5 395 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 PRMT9Q6P2P2 845 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 VITQ6UXI7 678 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 CCDC50Q8IVM0 306 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 DCUN1D3Q8IWE4 304 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 PTGR2Q8N8N7 351 aaPredicted RBP4.57□□□□□ -1.68
SMG1-207ENST00000563235 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.57□□□□□ -1.68
SMG1-207ENST00000563235 MCUQ8NE86 351 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 SNX33Q8WV41 574 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 ARRDC3Q96B67 414 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 CPB2Q96IY4 423 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 CPPED1Q9BRF8 314 aaPredicted RBP4.57□□□□□ -1.68
SMG1-207ENST00000563235 CPNE5Q9HCH3 593 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 TMEM161AQ9NX61 479 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 ABI3Q9P2A4 366 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 MYEF2Q9P2K5 600 aaKnown RBP4.57□□□□□ -1.68
SMG1-207ENST00000563235 NARFQ9UHQ1 456 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 CDH9Q9ULB4 789 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 TCHHQ07283 1943 aa4.57□□□□□ -1.68
SMG1-207ENST00000563235 B8ZZF3 427 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 NPIPA2E9PIF3 369 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 INSIG1O15503 277 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 LRCH4O75427 683 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 TRIM49P0CI25 452 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 TRIM49CP0CI26 452 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 PNLIPP16233 465 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 NCK1P16333 377 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 MSX1P28360 303 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ALDH3B2P48448 385 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 GNAQP50148 359 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 TPMTP51580 245 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 RGS8P57771 180 aaPredicted RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 CXCL9Q07325 125 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 LSAMPQ13449 338 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ARHGEF7Q14155 803 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 COL28A1Q2UY09 1125 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ATP13A5Q4VNC0 1218 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 CXorf66Q5JRM2 361 aaPredicted RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 TCHHL1Q5QJ38 904 aaPredicted RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 C1orf146Q5VVC0 180 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 PYHIN1Q6K0P9 492 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 FBXO42Q6P3S6 717 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 FIGLAQ6QHK4 219 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ZBTB49Q6ZSB9 765 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 FAM71CQ8NEG0 241 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 OR10J5Q8NHC4 309 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 CLEC4CQ8WTT0 213 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 IFT81Q8WYA0 676 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 RIT1Q92963 219 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 SLC7A6OSQ96CW6 309 aaPredicted RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 VPS35Q96QK1 796 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 CD180Q99467 661 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ZNF768Q9H5H4 540 aaKnown RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 VIPAS39Q9H9C1 493 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ZBTB26Q9HCK0 441 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 LYRM4Q9HD34 91 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 PIH1D3Q9NQM4 214 aaKnown RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 PDGFCQ9NRA1 345 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 OSER1Q9NX31 292 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ERVK13-1Q9NX77 482 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 WBP11Q9Y2W2 641 aaKnown RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 UMODL1Q5DID0 1318 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 SPATA31A1Q5TZJ5 1347 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 SPATA31A5Q5VU36 1347 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 SPATA31A7Q8IWB4 1347 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 WDR33Q9C0J8 1336 aaKnown RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 ABCC11Q96J66 1382 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 LMTK2Q8IWU2 1503 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 LOC102723971A0A1B0GUV8 181 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 PRAMEF22A3QJZ6 481 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms