RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TIMM50Q3ZCQ8 353 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 PRSS36Q5K4E3 855 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 UNC5DQ6UXZ4 953 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 SNX29P2Q8IUI4 249 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 CCDC103Q8IW40 242 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 LAS2Q8IYD9 372 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 OR2A12Q8NGT7 310 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 HCAR2Q8TDS4 363 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 HPS1Q92902 700 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 SCAMP4Q969E2 229 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 SLC35A5Q9BS91 424 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 EFCAB11Q9BUY7 163 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 EPHX3Q9H6B9 360 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 TMEM184CQ9NVA4 438 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 GPATCH2Q9NW75 528 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 RAPGEFL1Q9UHV5 662 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 ABT1Q9ULW3 272 aaKnown RBP12.56□□□□□ -0.4
USB1-207ENST00000563149 EXO1Q9UQ84 846 aaKnown RBP12.56□□□□□ -0.4
USB1-207ENST00000563149 HCN4Q9Y3Q4 1203 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 OR2AG2A6NM03 316 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 SNX4O95219 450 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 MED26O95402 600 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 KRT75O95678 551 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 SLC16A8O95907 504 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 PTTG1O95997 202 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 LRG1P02750 347 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 ADORA3P0DMS8 318 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 ETFAP13804 333 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 LAG3P18627 525 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 AQP1P29972 269 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 ETV6P41212 452 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 LIMS1P48059 325 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 PRIM2P49643 509 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 CDH12P55289 794 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 CDC42P60953 191 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 HBA1P69905 142 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 EEF1A2Q05639 463 aaKnown RBP12.56□□□□□ -0.4
USB1-207ENST00000563149 EXOC3L2Q2M3D2 409 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 ZNF385BQ569K4 471 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 TPRG1LQ5T0D9 272 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 HIST2H2AA3Q6FI13 130 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 FAM92BQ6ZTR7 304 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 Q6ZVL8 140 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 Q6ZVU0 165 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 SCAIQ8N9R8 606 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 SLAIN1Q8ND83 568 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 CD99L2Q8TCZ2 262 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 CHAC2Q8WUX2 184 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 ZNF689Q96CS4 500 aaPredicted RBP12.56□□□□□ -0.4
USB1-207ENST00000563149 TXNDC15Q96J42 360 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 PIP5K1AQ99755 562 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 RIOK2Q9BVS4 552 aaKnown RBP12.56□□□□□ -0.4
USB1-207ENST00000563149 CDCA4Q9BXL8 241 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 MYNNQ9NPC7 610 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 IMPAD1Q9NX62 359 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 SLCO3A1Q9UIG8 710 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 DUSP12Q9UNI6 340 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 FAM32AQ9Y421 112 aaKnown RBP12.56□□□□□ -0.4
USB1-207ENST00000563149 DYRK1BQ9Y463 629 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 SCN5AQ14524 2016 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 FADS2P1A8MWK0 482 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 DSCR3O14972 297 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 TSPAN6O43657 245 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 STSP08842 583 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 FURINP09958 794 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 C1GALT1C1LP0DN25 315 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 ARAFP10398 606 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 CTSAP10619 480 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 RHCEP18577 417 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 TGFBR1P36897 503 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 XCR1P46094 333 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 BDKRB1P46663 353 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 IDH2P48735 452 aaKnown RBP12.55□□□□□ -0.4
USB1-207ENST00000563149 RGS6P49758 472 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 CCL23P55773 120 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 CDK6Q00534 326 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 ARMCX4Q5H9R4 360 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 ASTLQ6HA08 431 aaPredicted RBP12.55□□□□□ -0.4
USB1-207ENST00000563149 Q6ZPB1 254 aaPredicted RBP12.55□□□□□ -0.4
USB1-207ENST00000563149 DPPA4Q7L190 304 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 TECPR1Q7Z6L1 1165 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 SLC44A2Q8IWA5 706 aaPredicted RBP12.55□□□□□ -0.4
USB1-207ENST00000563149 NRSN1Q8IZ57 195 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 GLYATL1Q969I3 302 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 PPCDCQ96CD2 204 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 NIPSNAP1Q9BPW8 284 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 CDADC1Q9BWV3 514 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 KLHL25Q9H0H3 589 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 ABCB10Q9NRK6 738 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 MKLN1Q9UL63 735 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 ANGPT4Q9Y264 503 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 TSC22D4Q9Y3Q8 395 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 ENPP4Q9Y6X5 453 aa12.55□□□□□ -0.4
USB1-207ENST00000563149 TMEM202A6NGA9 273 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 TEX28O15482 410 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 LILRB3O75022 631 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 CCNB2O95067 398 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 C6orf47O95873 294 aa12.54□□□□□ -0.4
USB1-207ENST00000563149 DBTP11182 482 aaKnown RBP12.54□□□□□ -0.4
USB1-207ENST00000563149 PIPP12273 146 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms