RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 LAPTM5Q13571 262 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 DNASE1L3Q13609 305 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 PWP1Q13610 501 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 IL10RAQ13651 578 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 CHI3L2Q15782 390 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 MUM1Q2TAK8 710 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 NKAIN1Q4KMZ8 207 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 DEFB134Q4QY38 66 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 YOD1Q5VVQ6 348 aaPredicted RBP9.28□□□□□ -0.92
CLK3-208ENST00000562626 CLEC6AQ6EIG7 209 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 MRPL14Q6P1L8 145 aaKnown RBP9.28□□□□□ -0.92
CLK3-208ENST00000562626 CYB5D1Q6P9G0 228 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 SHISA6Q6ZSJ9 500 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 ESX1Q8N693 406 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 IL22RA1Q8N6P7 574 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 ENDOVQ8N8Q3 282 aaKnown RBP9.28□□□□□ -0.92
CLK3-208ENST00000562626 PROKR1Q8TCW9 393 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 CCDC126Q96EE4 140 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 MMABQ96EY8 250 aaPredicted RBP9.28□□□□□ -0.92
CLK3-208ENST00000562626 SLC7A5P2Q9GIP4 190 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 DRC3Q9H069 523 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 CPNE5Q9HCH3 593 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 PRDM7Q9NQW5 492 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 TXLNGQ9NUQ3 528 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 HCN3Q9P1Z3 774 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 MID2Q9UJV3 735 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 PADI1Q9ULC6 663 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 NAALAD2Q9Y3Q0 740 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 TSC22D4Q9Y3Q8 395 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 ITPR1Q14643 2758 aa9.28□□□□□ -0.92
CLK3-208ENST00000562626 ANKDD1BA6NHY2 528 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 MASP2O00187 686 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 PLPP1O14494 284 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 ERI3O43414 337 aaKnown RBP9.27□□□□□ -0.93
CLK3-208ENST00000562626 NPHS1O60500 1241 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 GALR3O60755 368 aaPredicted RBP9.27□□□□□ -0.93
CLK3-208ENST00000562626 NSA2O95478 260 aaKnown RBP9.27□□□□□ -0.93
CLK3-208ENST00000562626 ESRRBO95718 433 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 JUNP05412 331 aaKnown RBP9.27□□□□□ -0.93
CLK3-208ENST00000562626 UMODP07911 640 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 HBQ1P09105 142 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 ALOX12P18054 663 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 CERS1P27544 350 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 PLA2G16P53816 162 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 SLC18A1P54219 525 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 ARSFP54793 590 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 DCDP81605 110 aaKnown RBP9.27□□□□□ -0.93
CLK3-208ENST00000562626 RGS1Q08116 209 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 RUNX2Q13950 521 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 FAM53BQ14153 422 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 RCN2Q14257 317 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 ERV3-1Q14264 604 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 ABRAXAS2Q15018 415 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 NCF4Q15080 339 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 NKG7Q16617 165 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 FAM214AQ32MH5 1076 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 VWA2Q5GFL6 755 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 ARL13AQ5H913 290 aaPredicted RBP9.27□□□□□ -0.93
CLK3-208ENST00000562626 PAGE2BQ5JRK9 111 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 ARHGAP40Q5TG30 622 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 GARNL3Q5VVW2 1013 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 MLIPQ5VWP3 458 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 FRG2Q64ET8 278 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 ABHD17CQ6PCB6 329 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 RIPOR1Q6ZS17 1223 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 CUZD1Q86UP6 607 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 LAPTM4BQ86VI4 370 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 NUDCD3Q8IVD9 361 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 ZC3H7AQ8IWR0 971 aaKnown RBP9.27□□□□□ -0.93
CLK3-208ENST00000562626 TMEM52Q8NDY8 209 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 TRPV3Q8NET8 790 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 AGR3Q8TD06 166 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 FRG2BQ96QU4 278 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 SORT1Q99523 831 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 SPSB2Q99619 263 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 PAIP2Q9BPZ3 127 aaKnown RBP9.27□□□□□ -0.93
CLK3-208ENST00000562626 C17orf62Q9BQA9 187 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 RBCK1Q9BYM8 510 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 PITHD1Q9GZP4 211 aaPredicted RBP9.27□□□□□ -0.93
CLK3-208ENST00000562626 TUBB1Q9H4B7 451 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 ACTL8Q9H568 366 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 ZNF304Q9HCX3 659 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 ZDHHC2Q9UIJ5 367 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 FIS1Q9Y3D6 152 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 SLC22A7Q9Y694 548 aa9.27□□□□□ -0.93
CLK3-208ENST00000562626 A0A087WV48 116 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 TMEM8BA6NDV4 472 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 VSTM2BA6NLU5 285 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 FAM227AF5H4B4 570 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 BIRC5O15392 142 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 NKX2-8O15522 239 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 EEDO75530 441 aaKnown RBP9.26□□□□□ -0.93
CLK3-208ENST00000562626 KLK3P07288 261 aaPredicted RBP9.26□□□□□ -0.93
CLK3-208ENST00000562626 CCNYL3P0C7X3 344 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 FBLP22087 321 aaKnown RBP9.26□□□□□ -0.93
CLK3-208ENST00000562626 BSGP35613 385 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 PIK3CBP42338 1070 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 HNRNPFP52597 415 aaKnown RBP9.26□□□□□ -0.93
CLK3-208ENST00000562626 PKNOX1P55347 436 aa9.26□□□□□ -0.93
CLK3-208ENST00000562626 BTN3A2P78410 334 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms