RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 FAM47BQ8NA70 645 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 C11orf65Q8NCR3 313 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 OR52N2Q8NGI0 321 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 OR2A1Q8NGT9 310 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 OR5K1Q8NHB7 308 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 ZFP28Q8NHY6 868 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 MAGEE2Q8TD90 523 aaPredicted RBP12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 OR1E3Q8WZA6 343 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 RGMAQ96B86 450 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 RMND5BQ96G75 393 aaPredicted RBP12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 PRAP1Q96NZ9 151 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 OSBPL10Q9BXB5 764 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 ZNF717Q9BY31 904 aaPredicted RBP12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 ASPSCR1Q9BZE9 553 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 MIEF1Q9NQG6 463 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 TMEM184CQ9NVA4 438 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 PCOLCE2Q9UKZ9 415 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 ERVK-11Q9UQG0 969 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 PLEKHM1Q9Y4G2 1056 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 PCDHGB5Q9Y5G0 923 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 OR1F1O43749 312 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 PRICKLE3O43900 615 aaPredicted RBP12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 KRT75O95678 551 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 ZNF682O95780 498 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 C6orf47O95873 294 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 ALBP02768 609 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 GBAP04062 536 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 THRBP10828 461 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 CMPK1P30085 196 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 GRK3P35626 688 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 RXRGP48443 463 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 TPMTP51580 245 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 HBA1P69905 142 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 CYP4F2P78329 520 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 HEPACAMQ14CZ8 416 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 LRRC23Q53EV4 343 aaPredicted RBP12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 GCNT6Q5T4J0 391 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 RNF220Q5VTB9 566 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 TRIM40Q6P9F5 258 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 IYDQ6PHW0 289 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 USP51Q70EK9 711 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 PATL1Q86TB9 770 aaKnown RBP12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 STK32CQ86UX6 486 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 FAM124AQ86V42 546 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 ZDHHC21Q8IVQ6 265 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 PJA1Q8NG27 643 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 RPLP0P6Q8NHW5 317 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 PNPT1Q8TCS8 783 aaKnown RBP12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 CYGBQ8WWM9 190 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 GUCD1Q96NT3 240 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 F2RL3Q96RI0 385 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 CDX2Q99626 313 aaPredicted RBP12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 MYOCQ99972 504 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 RBM4BQ9BQ04 359 aaKnown RBP12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 SLC35A5Q9BS91 424 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 SARGQ9BW04 601 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 RBM4Q9BWF3 364 aaKnown RBP12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 YTHDF1Q9BYJ9 559 aaKnown RBP12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 GABARAPL1Q9H0R8 117 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 XKR8Q9H6D3 395 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 TMEM38AQ9H6F2 299 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 CLK4Q9HAZ1 481 aaKnown RBP12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 KCNK12Q9HB15 430 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 TM9SF3Q9HD45 589 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 MRPS30Q9NP92 439 aaKnown RBP12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 PRDM8Q9NQV8 689 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 TAS2R9Q9NYW1 312 aa12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 IFT80Q9P2H3 777 aaPredicted RBP12.08□□□□□ -0.48
AC055717.2-201ENST00000561864 A0A1W2PRB8 838 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 TCRBV21S2A2A0A5A6 115 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 FEZF1A0PJY2 475 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 POM121BA6NF01 834 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 OR52A4PA6NMU1 304 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 C10orf142B7Z368 130 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 PLOD2O00469 737 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 MAP3K13O43283 966 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 LATO43561 262 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 DPM1O60762 260 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 TNFRSF21O75509 655 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 IGLV3-19P01714 112 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 GABRG2P18507 467 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 EFNA1P20827 205 aaPredicted RBP12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 IGFBP4P22692 258 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 UQCRC2P22695 453 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 AHRP35869 848 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 MVDP53602 400 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 NR1H2P55055 460 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 CLDN2P57739 230 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 TUBA4AP68366 448 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 PPP2R2BQ00005 443 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 MC1RQ01726 317 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 SMAD4Q13485 552 aaKnown RBP12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 CCINQ13939 588 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 ZIC1Q15915 447 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 MPEG1Q2M385 716 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 RFX4Q33E94 735 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 CYBRD1Q53TN4 286 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 FOXB2Q5VYV0 432 aa12.07□□□□□ -0.48
AC055717.2-201ENST00000561864 TBPL2Q6SJ96 375 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms