RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 CYP4X1Q8N118 509 aa15.21■□□□□ 0.02
SNX1-213ENST00000561026 KIF2BQ8N4N8 673 aa15.21■□□□□ 0.02
SNX1-213ENST00000561026 THAP3Q8WTV1 239 aaPredicted RBP15.21■□□□□ 0.02
SNX1-213ENST00000561026 ITLN2Q8WWU7 325 aaPredicted RBP15.21■□□□□ 0.02
SNX1-213ENST00000561026 CCDC120Q96HB5 630 aa15.21■□□□□ 0.02
SNX1-213ENST00000561026 VPS39Q96JC1 886 aa15.21■□□□□ 0.02
SNX1-213ENST00000561026 NAPGQ99747 312 aaPredicted RBP15.21■□□□□ 0.02
SNX1-213ENST00000561026 EGFL8Q99944 293 aa15.21■□□□□ 0.02
SNX1-213ENST00000561026 MCMBPQ9BTE3 642 aa15.21■□□□□ 0.02
SNX1-213ENST00000561026 RHOJQ9H4E5 214 aa15.21■□□□□ 0.02
SNX1-213ENST00000561026 CDCP1Q9H5V8 836 aa15.21■□□□□ 0.02
SNX1-213ENST00000561026 SUCOQ9UBS9 1254 aaKnown RBP15.21■□□□□ 0.02
SNX1-213ENST00000561026 CTNNAL1Q9UBT7 734 aa15.21■□□□□ 0.02
SNX1-213ENST00000561026 IGKV3D-11A0A0A0MRZ8 115 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 PRSS44E7EML9 344 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 FAM227AF5H4B4 570 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 PSMD12O00232 456 aaPredicted RBP15.2■□□□□ 0.02
SNX1-213ENST00000561026 SLC19A2O60779 497 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 SP1P08047 785 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 RNH1P13489 461 aaKnown RBP15.2■□□□□ 0.02
SNX1-213ENST00000561026 GNAZP19086 355 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 MAOAP21397 527 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 PAFAH1B1P43034 410 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 RPL21P46778 160 aaKnown RBP15.2■□□□□ 0.02
SNX1-213ENST00000561026 ART3Q13508 389 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 TSNQ15631 228 aaKnown RBP15.2■□□□□ 0.02
SNX1-213ENST00000561026 KRTCAP3Q53RY4 240 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 MTFR2Q6P444 385 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 SLCO4C1Q6ZQN7 724 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 ADAMTSL2Q86TH1 951 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 ZBED8Q8IZ13 594 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 TMEM178AQ8NBL3 297 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 MARVELD3Q96A59 401 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 RHBDF1Q96CC6 855 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 GPR137Q96N19 417 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 AICDAQ9GZX7 198 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 POPDC3Q9HBV1 291 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 GPAMQ9HCL2 828 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 PRDM9Q9NQV7 894 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 NSMCE4AQ9NXX6 385 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 LRFN1Q9P244 771 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 SNX24Q9Y343 169 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 ABCA12Q86UK0 2595 aa15.2■□□□□ 0.02
SNX1-213ENST00000561026 TCRBV16S1A1N1A0A5B0 115 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 ARHGAP10A1A4S6 786 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 SAGE2PA6NJ88 616 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 C4orf51C9J302 202 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 H2AFYO75367 372 aaKnown RBP15.19■□□□□ 0.02
SNX1-213ENST00000561026 WDR47O94967 919 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 MLYCDO95822 493 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 C1GALT1C1LP0DN25 315 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 GDF5P43026 501 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 SLC6A12P48065 614 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 CASP6P55212 293 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 STXBP1P61764 594 aaKnown RBP15.19■□□□□ 0.02
SNX1-213ENST00000561026 ALDH6A1Q02252 535 aaKnown RBP15.19■□□□□ 0.02
SNX1-213ENST00000561026 ILF2Q12905 390 aaKnown RBP15.19■□□□□ 0.02
SNX1-213ENST00000561026 C18orf21Q32NC0 220 aaPredicted RBP15.19■□□□□ 0.02
SNX1-213ENST00000561026 TOR1AIP1Q5JTV8 583 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 ZNF468Q5VIY5 522 aaPredicted RBP15.19■□□□□ 0.02
SNX1-213ENST00000561026 SLC25A25Q6KCM7 469 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 FRA10AC1Q70Z53 315 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 GALNTL5Q7Z4T8 443 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 MRGPRGQ86SM5 289 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 KLHDC8AQ8IYD2 350 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 CA13Q8N1Q1 262 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 ARMC2Q8NEN0 867 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 NFAM1Q8NET5 270 aaPredicted RBP15.19■□□□□ 0.02
SNX1-213ENST00000561026 FRMD6Q96NE9 622 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 RHBGQ9H310 441 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 NECTIN3Q9NQS3 549 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 RNF14Q9UBS8 474 aa15.19■□□□□ 0.02
SNX1-213ENST00000561026 KLF2Q9Y5W3 355 aaPredicted RBP15.19■□□□□ 0.02
SNX1-213ENST00000561026 PIAS1O75925 651 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 PRF1P14222 555 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 TPP2P29144 1249 aaPredicted RBP15.18■□□□□ 0.02
SNX1-213ENST00000561026 MLF1P58340 268 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 BTN3A2P78410 334 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 POU4F1Q01851 419 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 MAPKAPK3Q16644 382 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 TMIGD1Q6UXZ0 262 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 RPTNQ6XPR3 784 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.18■□□□□ 0.02
SNX1-213ENST00000561026 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.18■□□□□ 0.02
SNX1-213ENST00000561026 ZNF808Q8N4W9 903 aaPredicted RBP15.18■□□□□ 0.02
SNX1-213ENST00000561026 BBOF1Q8ND07 529 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 TTLQ8NG68 377 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 KRT12Q99456 494 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 DERL2Q9GZP9 239 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 TSPAN10Q9H1Z9 355 aaPredicted RBP15.18■□□□□ 0.02
SNX1-213ENST00000561026 TRIM45Q9H8W5 580 aaPredicted RBP15.18■□□□□ 0.02
SNX1-213ENST00000561026 SMYD2Q9NRG4 433 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 SH3BGRL2Q9UJC5 107 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 ZNF835Q9Y2P0 537 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 CSMD1Q96PZ7 3565 aa15.18■□□□□ 0.02
SNX1-213ENST00000561026 PCNX1Q96RV3 2341 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 LRIT2A6NDA9 550 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 ENO4A6NNW6 628 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 NPIPA5E9PKD4 350 aa15.17■□□□□ 0.02
SNX1-213ENST00000561026 SLC25A12O75746 678 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms