RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 PRR35P0CG20 571 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 HNRNPH1P31943 449 aaKnown RBP12.45□□□□□ -0.42
SMAD3-213ENST00000560175 MSH2P43246 934 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 ALDH18A1P54886 795 aaKnown RBP12.45□□□□□ -0.42
SMAD3-213ENST00000560175 STXBP1P61764 594 aaKnown RBP12.45□□□□□ -0.42
SMAD3-213ENST00000560175 CHIT1Q13231 466 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 RAPSNQ13702 412 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 UAP1Q16222 522 aaPredicted RBP12.45□□□□□ -0.42
SMAD3-213ENST00000560175 PLEKHN1Q494U1 663 aaPredicted RBP12.45□□□□□ -0.42
SMAD3-213ENST00000560175 FAM153CQ494X1 144 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 XKR6Q5GH73 641 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 TECRLQ5HYJ1 363 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 AGAP7PQ5VUJ5 663 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 H3F3CQ6NXT2 135 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 CPEB2Q7Z5Q1 589 aaKnown RBP12.45□□□□□ -0.42
SMAD3-213ENST00000560175 ANKRD37Q7Z713 158 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 KBTBD2Q8IY47 623 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 CNPY4Q8N129 248 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 OR2L5Q8NG80 312 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 PPP4R1Q8TF05 950 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 GAL3ST3Q96A11 431 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 TBC1D20Q96BZ9 403 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 PEX11GQ96HA9 241 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 THOC3Q96J01 351 aaKnown RBP12.45□□□□□ -0.42
SMAD3-213ENST00000560175 AGAP4Q96P64 663 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 BARD1Q99728 777 aaKnown RBP12.45□□□□□ -0.42
SMAD3-213ENST00000560175 TUBB6Q9BUF5 446 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 RIC8BQ9NVN3 520 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 B3GNT3Q9Y2A9 372 aa12.45□□□□□ -0.42
SMAD3-213ENST00000560175 OR2W5A6NFC9 320 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 ANKDD1BA6NHY2 528 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 SUPT3HB4E1H0 165 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 CCNT2O60583 730 aaKnown RBP12.44□□□□□ -0.42
SMAD3-213ENST00000560175 SUPT3HO75486 399 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 S100BP04271 92 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-213ENST00000560175 SERPIND1P05546 499 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 SNRPAP09012 282 aaKnown RBP12.44□□□□□ -0.42
SMAD3-213ENST00000560175 RBP1P09455 135 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 RHOXF2BP0C7M4 288 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 HPDP32754 393 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-213ENST00000560175 GLRBP48167 497 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 MLLT10P55197 1068 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 RAB8AP61006 207 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 AP2B1P63010 937 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 IRF8Q02556 426 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 KCNC4Q03721 635 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 PAGE2BQ5JRK9 111 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 PLAG1Q6DJT9 500 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 FAAH2Q6GMR7 532 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 KLC3Q6P597 504 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 ISLR2Q6UXK2 745 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 QSOX2Q6ZRP7 698 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 LANCL3Q6ZV70 420 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 ZADH2Q8N4Q0 377 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 SNX31Q8N9S9 440 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 ZNF473Q8WTR7 871 aaKnown RBP12.44□□□□□ -0.42
SMAD3-213ENST00000560175 METTL21AQ8WXB1 218 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 TM9SF4Q92544 642 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 RHOXF2Q9BQY4 288 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 TRIM4Q9C037 500 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 PRDM7Q9NQW5 492 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 ZNF358Q9NW07 568 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 PSD3Q9NYI0 1048 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 OPTCQ9UBM4 332 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 C19orf25Q9UFG5 118 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-213ENST00000560175 IKBKGQ9Y6K9 419 aa12.44□□□□□ -0.42
SMAD3-213ENST00000560175 IGKV3D-11A0A0A0MRZ8 115 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 CLEC18AA5D8T8 446 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 ZNF860A6NHJ4 632 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 TRIM49D1C9J1S8 452 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 POC1B-GALNT4F8VUJ3 575 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 E2F3O00716 465 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 UGDHO60701 494 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 SBK3P0C264 359 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 RNH1P13489 461 aaKnown RBP12.43□□□□□ -0.42
SMAD3-213ENST00000560175 EPB42P16452 691 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 JAK1P23458 1154 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 TNFRSF8P28908 595 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 EEF1A2Q05639 463 aaKnown RBP12.43□□□□□ -0.42
SMAD3-213ENST00000560175 MFAP5Q13361 173 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 RUNX2Q13950 521 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 SLC29A2Q14542 456 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 IGFBP7Q16270 282 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 HIST2H2ACQ16777 129 aaPredicted RBP12.43□□□□□ -0.42
SMAD3-213ENST00000560175 PFKFB4Q16877 469 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 TSNAXIP1Q2TAA8 658 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 MINDY4Q4G0A6 757 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 TOR1AIP1Q5JTV8 583 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 COLEC12Q5KU26 742 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 LGSNQ5TDP6 509 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 LIPJQ5W064 366 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 HIST2H2AA3Q6FI13 130 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 ADNP2Q6IQ32 1131 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 GRHL2Q6ISB3 625 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 ABHD17CQ6PCB6 329 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 CLEC18BQ6UXF7 455 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 TAOK1Q7L7X3 1001 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 UBE3DQ7Z6J8 389 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 CA13Q8N1Q1 262 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 L3MBTL4Q8NA19 623 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms