RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 HES3Q5TGS1 186 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 GALNT18Q6P9A2 607 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 RIPOR1Q6ZS17 1223 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 CLNKQ7Z7G1 428 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 CPLX4Q7Z7G2 160 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 ZFAND4Q86XD8 727 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 C1orf52Q8N6N3 182 aaKnown RBP8.91□□□□□ -0.98
HERC1-206ENST00000559996 ANKS4BQ8N8V4 417 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 CAMKVQ8NCB2 501 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 OR2L5Q8NG80 312 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 CEP70Q8NHQ1 597 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 NUDT8Q8WV74 236 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 ADAMTS14Q8WXS8 1223 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 LIN37Q96GY3 246 aaPredicted RBP8.91□□□□□ -0.98
HERC1-206ENST00000559996 METTL2AQ96IZ6 378 aaKnown RBP8.91□□□□□ -0.98
HERC1-206ENST00000559996 TMEM74Q96NL1 305 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 SERPINI1Q99574 410 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 SIKE1Q9BRV8 207 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 REXO4Q9GZR2 422 aaKnown RBP8.91□□□□□ -0.98
HERC1-206ENST00000559996 FAM107BQ9H098 131 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 MYLK2Q9H1R3 596 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 ACTL8Q9H568 366 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 SYNDIG1Q9H7V2 258 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 DDX31Q9H8H2 851 aaKnown RBP8.91□□□□□ -0.98
HERC1-206ENST00000559996 LRTM1Q9HBL6 345 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 FBXO8Q9NRD0 319 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 FGF21Q9NSA1 209 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 C1orf109Q9NX04 203 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 SOHLH2Q9NX45 425 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 KCMF1Q9P0J7 381 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 SLC12A4Q9UP95 1085 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 EXO1Q9UQ84 846 aaKnown RBP8.91□□□□□ -0.98
HERC1-206ENST00000559996 DLGAP4Q9Y2H0 992 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 SLC22A7Q9Y694 548 aa8.91□□□□□ -0.98
HERC1-206ENST00000559996 SEC16AO15027 2179 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 FER1L5A0AVI2 2057 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 CFAP54Q96N23 3096 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 CEP250Q9BV73 2442 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 A0A0A6YYD5 115 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 A0A0G2JN53 185 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 DCDC2BA2VCK2 349 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 EFCAB7A8K855 629 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 ZSCAN9O15535 394 aaPredicted RBP8.9□□□□□ -0.98
HERC1-206ENST00000559996 ZNF749O43361 778 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 RGS14O43566 566 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 TMPRSS11DO60235 418 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 CSO75390 466 aaKnown RBP8.9□□□□□ -0.98
HERC1-206ENST00000559996 SEC22BO75396 215 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 SEMA3DO95025 777 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 EIF2S1P05198 315 aaKnown RBP8.9□□□□□ -0.98
HERC1-206ENST00000559996 SERPIND1P05546 499 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 ZNF888P0CJ79 500 aaPredicted RBP8.9□□□□□ -0.98
HERC1-206ENST00000559996 TROVE2P10155 538 aaKnown RBP eCLIP8.9□□□□□ -0.98
HERC1-206ENST00000559996 LBPP18428 481 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 ITIH1P19827 911 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 ATP5A1P25705 553 aaKnown RBP8.9□□□□□ -0.98
HERC1-206ENST00000559996 MRPL19P49406 292 aaKnown RBP8.9□□□□□ -0.98
HERC1-206ENST00000559996 PPM1FP49593 454 aaPredicted RBP8.9□□□□□ -0.98
HERC1-206ENST00000559996 NOVA1P51513 510 aaKnown RBP8.9□□□□□ -0.98
HERC1-206ENST00000559996 RAB8AP61006 207 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 PRSS53Q2L4Q9 553 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 TMEM35AQ53FP2 167 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 TCTE1Q5JU00 501 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 ZNF385CQ66K41 422 aaPredicted RBP8.9□□□□□ -0.98
HERC1-206ENST00000559996 OR4C11Q6IEV9 310 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 PWWP2BQ6NUJ5 590 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 COMMD6Q7Z4G1 85 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 ALYREFQ86V81 257 aaKnown RBP8.9□□□□□ -0.98
HERC1-206ENST00000559996 TBC1D19Q8N5T2 526 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 CSNK1A1LQ8N752 337 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 AGBL5Q8NDL9 886 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 BCAS4Q8TDM0 211 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 UCN3Q969E3 161 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 TUBGCP3Q96CW5 907 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 SLC45A3Q96JT2 553 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 EGLN2Q96KS0 407 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 TEX37Q96LM6 180 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 OR6C1Q96RD1 312 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 SLC52A3Q9NQ40 469 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 TCF7L2Q9NQB0 619 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 ASIC5Q9NY37 505 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 WASF3Q9UPY6 502 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 APOBEC2Q9Y235 224 aaKnown RBP8.9□□□□□ -0.98
HERC1-206ENST00000559996 ASB4Q9Y574 426 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 GPR45Q9Y5Y3 372 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 DCHS1Q96JQ0 3298 aa8.9□□□□□ -0.98
HERC1-206ENST00000559996 CNOT1A5YKK6 2376 aaKnown RBP8.89□□□□□ -0.99
HERC1-206ENST00000559996 HYKKA2RU49 373 aa8.89□□□□□ -0.99
HERC1-206ENST00000559996 B4E171 279 aa8.89□□□□□ -0.99
HERC1-206ENST00000559996 E9PBE3 544 aa8.89□□□□□ -0.99
HERC1-206ENST00000559996 ERI3O43414 337 aaKnown RBP8.89□□□□□ -0.99
HERC1-206ENST00000559996 KLHL41O60662 606 aa8.89□□□□□ -0.99
HERC1-206ENST00000559996 GALR3O60755 368 aaPredicted RBP8.89□□□□□ -0.99
HERC1-206ENST00000559996 VPS4BO75351 444 aa8.89□□□□□ -0.99
HERC1-206ENST00000559996 ONECUT2O95948 504 aa8.89□□□□□ -0.99
HERC1-206ENST00000559996 GBAP04062 536 aa8.89□□□□□ -0.99
HERC1-206ENST00000559996 BCKDHAP12694 445 aa8.89□□□□□ -0.99
HERC1-206ENST00000559996 ACPPP15309 386 aa8.89□□□□□ -0.99
HERC1-206ENST00000559996 ZNF28P17035 718 aa8.89□□□□□ -0.99
HERC1-206ENST00000559996 ALOX12P18054 663 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms