RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 ZNF549Q6P9A3 640 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 CORO6Q6QEF8 472 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 ZNF852Q6ZMS4 543 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 CDHR3Q6ZTQ4 885 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 Q6ZVL8 140 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 GLRX5Q86SX6 157 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 SERPINA9Q86WD7 417 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 SNX32Q86XE0 403 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 CEP97Q8IW35 865 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 ULK2Q8IYT8 1036 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 RBFAQ8N0V3 343 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 CLYBLQ8N0X4 340 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 NXPE1Q8N323 547 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 HDDC3Q8N4P3 179 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 AADATQ8N5Z0 425 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 ASCC1Q8N9N2 400 aaKnown RBP6.78□□□□□ -1.32
ZEB1-216ENST00000559496 RBM15BQ8NDT2 890 aaKnown RBP6.78□□□□□ -1.32
ZEB1-216ENST00000559496 RPLP0P6Q8NHW5 317 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 Q8TCH9 128 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 CXorf40AQ8TE69 158 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 GANCQ8TET4 914 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 CAPSLQ8WWF8 208 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 ULK4Q96C45 1275 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 TSNARE1Q96NA8 513 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 FAM111AQ96PZ2 611 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 SECISBP2Q96T21 854 aaKnown RBP6.78□□□□□ -1.32
ZEB1-216ENST00000559496 BTBD2Q9BX70 525 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 TRIM15Q9C019 465 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 C12orf65Q9H3J6 166 aaKnown RBP6.78□□□□□ -1.32
ZEB1-216ENST00000559496 FAM83DQ9H4H8 585 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 CD93Q9NPY3 652 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 WASH6PQ9NQA3 447 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 NFKBIL1Q9UBC1 381 aaPredicted RBP6.78□□□□□ -1.32
ZEB1-216ENST00000559496 DCDC2Q9UHG0 476 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 CD84Q9UIB8 345 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 PTBP2Q9UKA9 531 aaKnown RBP6.78□□□□□ -1.32
ZEB1-216ENST00000559496 CA14Q9ULX7 337 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 NDRG2Q9UN36 371 aaKnown RBP6.78□□□□□ -1.32
ZEB1-216ENST00000559496 ACOT9Q9Y305 439 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 VWA7Q9Y334 891 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 PLLPQ9Y342 182 aa6.78□□□□□ -1.32
ZEB1-216ENST00000559496 REV3LO60673 3130 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 A0A1W2PQF6 199 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 PSMD12O00232 456 aaPredicted RBP6.77□□□□□ -1.33
ZEB1-216ENST00000559496 PRMT5O14744 637 aaPredicted RBP6.77□□□□□ -1.33
ZEB1-216ENST00000559496 TSPAN6O43657 245 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 OR1I1O60431 355 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 VPS26AO75436 327 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 RHOBTB1O94844 696 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 OR5F1O95221 314 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 RASGRP1O95267 797 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 DNTTP04053 509 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 SLC35E2BP0CK96 405 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 C6P13671 934 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 PKMP14618 531 aaKnown RBP6.77□□□□□ -1.33
ZEB1-216ENST00000559496 ATP6V1B1P15313 513 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 ZNF7P17097 686 aaPredicted RBP6.77□□□□□ -1.33
ZEB1-216ENST00000559496 FDXRP22570 491 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 RPS3P23396 243 aaKnown RBP eCLIP6.77□□□□□ -1.33
ZEB1-216ENST00000559496 RRM2P31350 389 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 CA5AP35218 305 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 TRIM23P36406 574 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 ETV4P43268 484 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 CSRP3P50461 194 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 ETV1P50549 477 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 PGGT1BP53609 377 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 COPAP53621 1224 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 CDKN2DP55273 166 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 IL13RA1P78552 427 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 CDC20Q12834 499 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 STX3Q13277 289 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 ZNF460Q14592 562 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 ATP13A5Q4VNC0 1218 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 ZMAT1Q5H9K5 638 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 CLVS2Q5SYC1 327 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 ATAD3BQ5T9A4 648 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 N4BP2L1Q5TBK1 243 aaPredicted RBP6.77□□□□□ -1.33
ZEB1-216ENST00000559496 AGBL4Q5VU57 503 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 PTRHD1Q6GMV3 140 aaKnown RBP6.77□□□□□ -1.33
ZEB1-216ENST00000559496 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.77□□□□□ -1.33
ZEB1-216ENST00000559496 OVCH1Q7RTY7 1134 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 TECPR1Q7Z6L1 1165 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 CLEC14AQ86T13 490 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 AKAP14Q86UN6 197 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 PIM3Q86V86 326 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 RAVER1Q8IY67 606 aaKnown RBP6.77□□□□□ -1.33
ZEB1-216ENST00000559496 NRSN1Q8IZ57 195 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 GALNT4Q8N4A0 578 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 CISD2Q8N5K1 135 aaKnown RBP6.77□□□□□ -1.33
ZEB1-216ENST00000559496 TRAM1L1Q8N609 369 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 TTLQ8NG68 377 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 RFWD2Q8NHY2 731 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 LHFPL5Q8TAF8 219 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 KCTD4Q8WVF5 259 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 SCAMP4Q969E2 229 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 CIDECQ96AQ7 238 aaPredicted RBP6.77□□□□□ -1.33
ZEB1-216ENST00000559496 VPS33AQ96AX1 596 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 INTS12Q96CB8 462 aaKnown RBP6.77□□□□□ -1.33
ZEB1-216ENST00000559496 ISOC1Q96CN7 298 aa6.77□□□□□ -1.33
ZEB1-216ENST00000559496 AP2M1Q96CW1 435 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms