RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 NR1D1P20393 614 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 ECHS1P30084 290 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 TSFMP43897 325 aaKnown RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 CSRP3P50461 194 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 PLA2G16P53816 162 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 FOXL2P58012 376 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 TAS2R50P59544 299 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 RAB8AP61006 207 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 ARG2P78540 354 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 LSM11P83369 360 aaKnown RBP eCLIP4.13□□□□□ -1.75
SNX1-205ENST00000559339 IRF9Q00978 393 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 ACTN3Q08043 901 aaPredicted RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 CHIT1Q13231 466 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 DOC2AQ14183 400 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 SLC29A2Q14542 456 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 SETDB1Q15047 1291 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 PCBP2Q15366 365 aaKnown RBP eCLIP4.13□□□□□ -1.75
SNX1-205ENST00000559339 TLR1Q15399 786 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 EXT1Q16394 746 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 SYT16Q17RD7 645 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 BTBD16Q32M84 506 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 C18orf21Q32NC0 220 aaPredicted RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 TMEM35AQ53FP2 167 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 FBXO48Q5FWF7 155 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 CRB2Q5IJ48 1285 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 TOR1AIP1Q5JTV8 583 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 TEX35Q5T0J7 233 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 C10orf62Q5T681 223 aaPredicted RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 LCE2DQ5TA82 110 aaPredicted RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 ABHD17BQ5VST6 288 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 DMRTA1Q5VZB9 504 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 LIPJQ5W064 366 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 JMJD6Q6NYC1 403 aaPredicted RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 IGFL3Q6UXB1 125 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 ISLR2Q6UXK2 745 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 PRSS41Q7RTY9 318 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 CPEB2Q7Z5Q1 589 aaKnown RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 ZC3H7AQ8IWR0 971 aaKnown RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 PARP9Q8IXQ6 854 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.13□□□□□ -1.75
SNX1-205ENST00000559339 CENPLQ8N0S6 344 aaPredicted RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 IQCKQ8N0W5 287 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 AFAP1L2Q8N4X5 818 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 TEX9Q8N6V9 391 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 ANKRD53Q8N9V6 530 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 OR2L5Q8NG80 312 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 SUN3Q8TAQ9 357 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 UHMK1Q8TAS1 419 aaKnown RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 ADAMTS18Q8TE60 1221 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 UTP15Q8TED0 518 aaKnown RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 CREB3L4Q8TEY5 395 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 PPP4R1Q8TF05 950 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 UBTD2Q8WUN7 234 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 UBLCP1Q8WVY7 318 aaPredicted RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 GAL3ST3Q96A11 431 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 PNPLA2Q96AD5 504 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 ESAMQ96AP7 390 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 C8orf44Q96CB5 159 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 PHF21BQ96EK2 531 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 MOCOSQ96EN8 888 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 WDR34Q96EX3 536 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 CMTM7Q96FZ5 175 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 CNDP1Q96KN2 507 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 MAGEB10Q96LZ2 347 aaPredicted RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 LMF1Q96S06 567 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 ATOH8Q96SQ7 321 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 LPAR4Q99677 370 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 MRPL57Q9BQC6 102 aaKnown RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 TMEM79Q9BSE2 394 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 NPLQ9BXD5 320 aaPredicted RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 SLC6A16Q9GZN6 736 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 VN1R1Q9GZP7 353 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 EPN3Q9H201 632 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 MRPL46Q9H2W6 279 aaKnown RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 ZNF552Q9H707 407 aaPredicted RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 IPPKQ9H8X2 491 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 SYNPO2LQ9H987 977 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 L2HGDHQ9H9P8 463 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 AGPAT4Q9NRZ5 378 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 MS4A12Q9NXJ0 267 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 MAP10Q9P2G4 905 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 CPSF2Q9P2I0 782 aaKnown RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 PSMC3IPQ9P2W1 217 aaPredicted RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 COPG2Q9UBF2 871 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 FETUBQ9UGM5 382 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 VPS4AQ9UN37 437 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 MRPS2Q9Y399 296 aaKnown RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 PCDHGA11Q9Y5H2 935 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 A0A1W2PQ72 361 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 ARHGAP10A1A4S6 786 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 BLACEA4D250 179 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 CCDC151A5D8V7 595 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 ZNF860A6NHJ4 632 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 A8MUI8 341 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 H0YIV9 168 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 STX16-NPEPL1H3BU86 382 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 K7EM74 188 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 STX16O14662 325 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 DYRK3O43781 588 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 KLK8O60259 260 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms