RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MMP11P24347 488 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 SLC1A2P43004 574 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 ARF3P61204 181 aaPredicted RBP6.97□□□□□ -1.29
SPG11-213ENST00000558988 CCZ1BP86790 482 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 CCZ1P86791 482 aaPredicted RBP6.97□□□□□ -1.29
SPG11-213ENST00000558988 MPP1Q00013 466 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 CDK16Q00536 496 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 EEF1A2Q05639 463 aaKnown RBP6.97□□□□□ -1.29
SPG11-213ENST00000558988 KLC1Q07866 573 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 AIMP2Q13155 320 aaKnown RBP6.97□□□□□ -1.29
SPG11-213ENST00000558988 KCNJ11Q14654 390 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 TYSND1Q2T9J0 566 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 FAM214AQ32MH5 1076 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 TUBB8Q3ZCM7 444 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 ANKRD20A4Q4UJ75 823 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 FNDC7Q5VTL7 733 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 KIAA0930Q6ICG6 404 aaPredicted RBP6.97□□□□□ -1.29
SPG11-213ENST00000558988 DRICH1Q6PGQ1 229 aaPredicted RBP6.97□□□□□ -1.29
SPG11-213ENST00000558988 CCDC137Q6PK04 289 aaKnown RBP6.97□□□□□ -1.29
SPG11-213ENST00000558988 CENPUQ71F23 418 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 COX15Q7KZN9 410 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 PLD3Q8IV08 490 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 REXO1L1PQ8IX06 675 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 CSNK1A1LQ8N752 337 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 OR2A1Q8NGT9 310 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 OR9A1PQ8NGU1 263 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 SSC4DQ8WTU2 575 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 SMPDL3AQ92484 453 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 RERGQ96A58 199 aaPredicted RBP6.97□□□□□ -1.29
SPG11-213ENST00000558988 FKBP10Q96AY3 582 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 SNRNP40Q96DI7 357 aaKnown RBP6.97□□□□□ -1.29
SPG11-213ENST00000558988 MMABQ96EY8 250 aaPredicted RBP6.97□□□□□ -1.29
SPG11-213ENST00000558988 PKP4Q99569 1192 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 NDNQ99608 321 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 ZFYVE21Q9BQ24 234 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 CHRNA10Q9GZZ6 450 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 ZNF160Q9HCG1 818 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 ZNF304Q9HCX3 659 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 FAM114A2Q9NRY5 505 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 HOMER3Q9NSC5 361 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 C20orf96Q9NUD7 363 aaPredicted RBP6.97□□□□□ -1.29
SPG11-213ENST00000558988 SPATA7Q9P0W8 599 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 TRPC4Q9UBN4 977 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 PLEKHB1Q9UF11 243 aaPredicted RBP6.97□□□□□ -1.29
SPG11-213ENST00000558988 PCYOX1Q9UHG3 505 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 C3orf18Q9UK00 162 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 PPT2Q9UMR5 302 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 ZKSCAN5Q9Y2L8 839 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 MRFAP1Q9Y605 127 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 HS3ST3B1Q9Y662 390 aa6.97□□□□□ -1.29
SPG11-213ENST00000558988 RP1L1Q8IWN7 2480 aaPredicted RBP6.96□□□□□ -1.29
SPG11-213ENST00000558988 BOD1L1Q8NFC6 3051 aa6.96□□□□□ -1.29
SPG11-213ENST00000558988 A0A0A6YYC8 382 aaPredicted RBP6.96□□□□□ -1.3
SPG11-213ENST00000558988 A0A1W2PPV9 198 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 CLEC18AA5D8T8 446 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 ANKUB1A6NFN9 424 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 SDR42E2A6NKP2 422 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 TARM1B6A8C7 271 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 I3L1I5 382 aaPredicted RBP6.96□□□□□ -1.3
SPG11-213ENST00000558988 PGRMC1O00264 195 aaKnown RBP6.96□□□□□ -1.3
SPG11-213ENST00000558988 HAT1O14929 419 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 VPS26AO75436 327 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 BANF1O75531 89 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 IPO13O94829 963 aaKnown RBP6.96□□□□□ -1.3
SPG11-213ENST00000558988 CNOT4O95628 575 aaKnown RBP6.96□□□□□ -1.3
SPG11-213ENST00000558988 PNLIPRP1P54315 467 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 CDC16Q13042 620 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 PPP1R7Q15435 360 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 SYT16Q17RD7 645 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 MUM1Q2TAK8 710 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 HKDC1Q2TB90 917 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 TTLL9Q3SXZ7 439 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 VWA2Q5GFL6 755 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 AGAP7PQ5VUJ5 663 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 YOD1Q5VVQ6 348 aaPredicted RBP6.96□□□□□ -1.3
SPG11-213ENST00000558988 KIRREL2Q6UWL6 708 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 CLEC18BQ6UXF7 455 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 ZNF627Q7L945 461 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 PIWIL4Q7Z3Z4 852 aaKnown RBP6.96□□□□□ -1.3
SPG11-213ENST00000558988 CUZD1Q86UP6 607 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 CAND1Q86VP6 1230 aaKnown RBP6.96□□□□□ -1.3
SPG11-213ENST00000558988 CPNE9Q8IYJ1 553 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 SIRT6Q8N6T7 355 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 CLEC18CQ8NCF0 446 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 OR11G2Q8NGC1 345 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 DNAJB14Q8TBM8 379 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 STT3BQ8TCJ2 826 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 INPP5DQ92835 1189 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 ZUFSPQ96AP4 578 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 MIEF2Q96C03 454 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 C10orf90Q96M02 699 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 SERPINB12Q96P63 405 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 AGAP4Q96P64 663 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 GPR21Q99679 349 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 WDR77Q9BQA1 342 aaPredicted RBP6.96□□□□□ -1.3
SPG11-213ENST00000558988 EPS8L2Q9H6S3 715 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 WDR54Q9H977 334 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 SYNPO2LQ9H987 977 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 MRM3Q9HC36 420 aaKnown RBP6.96□□□□□ -1.3
SPG11-213ENST00000558988 IARS2Q9NSE4 1012 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms