RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 DHRS12A0PJE2 317 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 PABPN1LA6NDY0 278 aaKnown RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 METTL15A6NJ78 407 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 CLDN24A6NM45 220 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 A8MU76 341 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 FAM25AB3EWG3 89 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 FAM25CB3EWG5 89 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 FAM25GB3EWG6 89 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 STX16-NPEPL1H3BU86 382 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 FXYD1O00168 92 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 UPK1AO00322 258 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 NME4O00746 187 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 EI24O14681 340 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 NKX2-8O15522 239 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ZW10O43264 779 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 NDUFA2O43678 99 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 SYNCRIPO60506 623 aaKnown RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 TSPAN1O60635 241 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 TIPRLO75663 272 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 CABYRO75952 493 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 SRP72O76094 671 aaKnown RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 CSPG5O95196 566 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 TNFRSF6BO95407 300 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 HSPA4LO95757 839 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 CER1O95813 267 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 F9P00740 461 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 HLA-DRAP01903 254 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 CHRNA1P02708 482 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 FYNP06241 537 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 IGKV2-30P06310 120 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 PCNAP12004 261 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 GFAPP14136 432 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 AKR1B1P15121 316 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 PGAM1P18669 254 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 TNFRSF1BP20333 461 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 PSMA4P25789 261 aaKnown RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 EEF1DP29692 281 aaKnown RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 IFNA8P32881 189 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 SHMT1P34896 483 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 UGT2B10P36537 528 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 HADHAP40939 763 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 GARSP41250 739 aaKnown RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 HTR3AP46098 478 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 RPS9P46781 194 aaKnown RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 RPS5P46782 204 aaKnown RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 GNPDA1P46926 289 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ALDH3A2P51648 485 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 IST1P53990 364 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 RAD23AP54725 363 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 FAM3BP58499 235 aaPredicted RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 DNAJB13P59910 316 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 CXCR4P61073 352 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 B2MP61769 119 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 COPZ1P61923 177 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ZNF45Q02386 682 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 INCA1Q0VD86 236 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 IL18R1Q13478 541 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 GPR50Q13585 617 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 TFDP2Q14188 446 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 STARD3Q14849 445 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 NEDD8Q15843 81 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 HADHQ16836 314 aaKnown RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 DGUOKQ16854 277 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 AAK1Q2M2I8 961 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 C15orf59Q2T9L4 293 aaPredicted RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 SPANXN3Q5MJ09 141 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.12□□□□□ -1.91
HERC1-203ENST00000558532 ATAD3CQ5T2N8 411 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 GRTP1Q5TC63 336 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 LIPMQ5VYY2 423 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 AWAT2Q6E213 333 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 LAIR2Q6ISS4 152 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ZNF544Q6NX49 715 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ZNF793Q6ZN11 406 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 GET4Q7L5D6 327 aaPredicted RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 NIPA1Q7RTP0 329 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 TAS2R42Q7RTR8 314 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 MRPL10Q7Z7H8 261 aaKnown RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 GLRX5Q86SX6 157 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 DHFR2Q86XF0 187 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 WDR49Q8IV35 697 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 CDKL3Q8IVW4 592 aaPredicted RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 KLHDC8BQ8IXV7 354 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 KIAA2013Q8IYS2 634 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 UBQLNLQ8IYU4 475 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 TBC1D21Q8IYX1 336 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ADGRF3Q8IZF5 1079 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 GPD1LQ8N335 351 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 CLIP4Q8N3C7 705 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 WDTC1Q8N5D0 677 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 MINDY1Q8N5J2 469 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 PLD5Q8N7P1 536 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 ZNF366Q8N895 744 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 Q8N9G6 341 aaPredicted RBP3.12□□□□□ -1.91
HERC1-203ENST00000558532 EXD3Q8N9H8 876 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 KDM1BQ8NB78 822 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 TMEM35BQ8NCS4 154 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 TMEM161BQ8NDZ6 487 aa3.12□□□□□ -1.91
HERC1-203ENST00000558532 CHDHQ8NE62 594 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms