RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 GTF2H2CQ6P1K8 395 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 MED27Q6P2C8 311 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 TMEM205Q6UW68 189 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 GOLGA7Q7Z5G4 137 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 LAS2Q8IYD9 372 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 TMEM151AQ8N4L1 468 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 C8orf44Q96CB5 159 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 MS4A6EQ96DS6 147 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 NUDT9Q9BW91 350 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 TBK1Q9UHD2 729 aa21.59■■□□□ 1.05
TDP1-216ENST00000556867 CHST10O43529 356 aa21.58■■□□□ 1.05
TDP1-216ENST00000556867 UGDHO60701 494 aa21.58■■□□□ 1.05
TDP1-216ENST00000556867 ALOX12BO75342 701 aa21.58■■□□□ 1.05
TDP1-216ENST00000556867 SBK3P0C264 359 aa21.58■■□□□ 1.05
TDP1-216ENST00000556867 COX6A1P12074 109 aa21.58■■□□□ 1.05
TDP1-216ENST00000556867 EEF1DP29692 281 aaKnown RBP21.58■■□□□ 1.05
TDP1-216ENST00000556867 SERPINB1P30740 379 aa21.58■■□□□ 1.05
TDP1-216ENST00000556867 HSD17B3P37058 310 aa21.58■■□□□ 1.05
TDP1-216ENST00000556867 RASA2Q15283 850 aa21.58■■□□□ 1.05
TDP1-216ENST00000556867 MINDY4Q4G0A6 757 aa21.58■■□□□ 1.05
TDP1-216ENST00000556867 PTRH1Q86Y79 214 aaKnown RBP21.58■■□□□ 1.05
TDP1-216ENST00000556867 AENQ8WTP8 325 aaKnown RBP21.58■■□□□ 1.05
TDP1-216ENST00000556867 PHF21BQ96EK2 531 aa21.58■■□□□ 1.05
TDP1-216ENST00000556867 PEX11GQ96HA9 241 aa21.58■■□□□ 1.05
TDP1-216ENST00000556867 SMAD5Q99717 465 aaKnown RBP21.58■■□□□ 1.05
TDP1-216ENST00000556867 LANCL2Q9NS86 450 aa21.58■■□□□ 1.05
TDP1-216ENST00000556867 ZNF451Q9Y4E5 1061 aa21.58■■□□□ 1.05
TDP1-216ENST00000556867 HEMK1Q9Y5R4 338 aaPredicted RBP21.58■■□□□ 1.05
TDP1-216ENST00000556867 ERI3O43414 337 aaKnown RBP21.57■■□□□ 1.04
TDP1-216ENST00000556867 KLHL41O60662 606 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 DNAJB6O75190 326 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 C8orf89P0DMQ9 161 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 OLR1P78380 273 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 MFSD4BQ5TF39 518 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 VWA5B1Q5TIE3 1220 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 LIPJQ5W064 366 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 FAAH2Q6GMR7 532 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 NDUFAF7Q7L592 441 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 OR2L5Q8NG80 312 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 OR7G3Q8NG95 312 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 ZNF473Q8WTR7 871 aaKnown RBP21.57■■□□□ 1.04
TDP1-216ENST00000556867 TBC1D20Q96BZ9 403 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 REXO4Q9GZR2 422 aaKnown RBP21.57■■□□□ 1.04
TDP1-216ENST00000556867 IPPKQ9H8X2 491 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 ACTR8Q9H981 624 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 TMEM216Q9P0N5 145 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 PCTPQ9UKL6 214 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 TSC22D4Q9Y3Q8 395 aa21.57■■□□□ 1.04
TDP1-216ENST00000556867 SCN2AQ99250 2005 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 IGHV1-45A0A0A0MS14 117 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 GOLGA8RI6L899 631 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 FHP07954 510 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 GSTA1P08263 222 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 PYGBP11216 843 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 SLCO1A2P46721 670 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 BTN3A2P78410 334 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 EEF1A2Q05639 463 aaKnown RBP21.56■■□□□ 1.04
TDP1-216ENST00000556867 KLRB1Q12918 225 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 RAPSNQ13702 412 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 TRIM40Q6P9F5 258 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 EMBQ6PCB8 327 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 ZNF605Q86T29 641 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 HPS6Q86YV9 775 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 METTL21AQ8WXB1 218 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 FAR2Q96K12 515 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 QRFPRQ96P65 431 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 MS4A8Q9BY19 250 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 RBCK1Q9BYM8 510 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 ZNF700Q9H0M5 742 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 ZNF160Q9HCG1 818 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 C5AR2Q9P296 337 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.56■■□□□ 1.04
TDP1-216ENST00000556867 ADGRE2Q9UHX3 823 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 ANAPC2Q9UJX6 822 aa21.56■■□□□ 1.04
TDP1-216ENST00000556867 V9GYY5 206 aaPredicted RBP21.56■■□□□ 1.04
TDP1-216ENST00000556867 A0A088AWK7 358 aa21.55■■□□□ 1.04
TDP1-216ENST00000556867 NSG1A0A0A6YYJ2 146 aa21.55■■□□□ 1.04
TDP1-216ENST00000556867 A8MT66 165 aa21.55■■□□□ 1.04
TDP1-216ENST00000556867 SUV39H1O43463 412 aa21.55■■□□□ 1.04
TDP1-216ENST00000556867 RPS17P08708 135 aaKnown RBP21.55■■□□□ 1.04
TDP1-216ENST00000556867 RNH1P13489 461 aaKnown RBP21.55■■□□□ 1.04
TDP1-216ENST00000556867 ZNF10P21506 573 aaPredicted RBP21.55■■□□□ 1.04
TDP1-216ENST00000556867 JAK1P23458 1154 aa21.55■■□□□ 1.04
TDP1-216ENST00000556867 ITGA3P26006 1051 aa21.55■■□□□ 1.04
TDP1-216ENST00000556867 RHAGQ02094 409 aa21.55■■□□□ 1.04
TDP1-216ENST00000556867 Q0VFX4 171 aa21.55■■□□□ 1.04
TDP1-216ENST00000556867 PCOLCEQ15113 449 aa21.55■■□□□ 1.04
TDP1-216ENST00000556867 ABHD17CQ6PCB6 329 aa21.55■■□□□ 1.04
TDP1-216ENST00000556867 MYLK4Q86YV6 388 aaPredicted RBP21.55■■□□□ 1.04
TDP1-216ENST00000556867 L3MBTL4Q8NA19 623 aa21.55■■□□□ 1.04
TDP1-216ENST00000556867 PLPP5Q8NEB5 264 aa21.55■■□□□ 1.04
TDP1-216ENST00000556867 EPS8L3Q8TE67 593 aaKnown RBP21.55■■□□□ 1.04
TDP1-216ENST00000556867 NPLQ9BXD5 320 aaPredicted RBP21.55■■□□□ 1.04
TDP1-216ENST00000556867 C1QTNF3Q9BXJ4 246 aa21.55■■□□□ 1.04
TDP1-216ENST00000556867 ZNF552Q9H707 407 aaPredicted RBP21.55■■□□□ 1.04
TDP1-216ENST00000556867 RIC8BQ9NVN3 520 aa21.55■■□□□ 1.04
TDP1-216ENST00000556867 C19orf25Q9UFG5 118 aaPredicted RBP21.55■■□□□ 1.04
TDP1-216ENST00000556867 PCDHGA11Q9Y5H2 935 aa21.55■■□□□ 1.04
TDP1-216ENST00000556867 H0YIV9 168 aa21.54■■□□□ 1.04
TDP1-216ENST00000556867 OR7A17O14581 309 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms