RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.64■□□□□ 0.41
CDKN3-209ENST00000556102 THOC6Q86W42 341 aaKnown RBP17.64■□□□□ 0.41
CDKN3-209ENST00000556102 CYP4X1Q8N118 509 aa17.64■□□□□ 0.41
CDKN3-209ENST00000556102 ANKRD53Q8N9V6 530 aa17.64■□□□□ 0.41
CDKN3-209ENST00000556102 AIF1LQ9BQI0 150 aa17.64■□□□□ 0.41
CDKN3-209ENST00000556102 IKZF3Q9UKT9 509 aa17.64■□□□□ 0.41
CDKN3-209ENST00000556102 OTOGQ6ZRI0 2925 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 TCRBV16S1A1N1A0A5B0 115 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 CTAGE15A4D2H0 777 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 PSMD12O00232 456 aaPredicted RBP17.63■□□□□ 0.41
CDKN3-209ENST00000556102 ASNA1O43681 348 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 NME2P1O60361 137 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 SMIM10L1P0DMW3 83 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 RNH1P13489 461 aaKnown RBP17.63■□□□□ 0.41
CDKN3-209ENST00000556102 ZNF37AP17032 561 aaPredicted RBP17.63■□□□□ 0.41
CDKN3-209ENST00000556102 NME2P22392 152 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 TPP2P29144 1249 aaPredicted RBP17.63■□□□□ 0.41
CDKN3-209ENST00000556102 HNF4AP41235 474 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 MLF1P58340 268 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 RAB8AP61006 207 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 BTG2P78543 158 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 MAPKAPK3Q16644 382 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 HP1BP3Q5SSJ5 553 aaPredicted RBP17.63■□□□□ 0.41
CDKN3-209ENST00000556102 STEAP4Q687X5 459 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 NXPE4Q6UWF7 544 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 TMPRSS11BQ86T26 416 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 CTAGE6Q86UF2 777 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 GHDCQ8N2G8 530 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 ADAMTS18Q8TE60 1221 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 LRRC39Q96DD0 335 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 SMIM10Q96HG1 83 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 TRIM51Q9BSJ1 452 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 TRIM45Q9H8W5 580 aaPredicted RBP17.63■□□□□ 0.41
CDKN3-209ENST00000556102 PRDM9Q9NQV7 894 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 MEMO1Q9Y316 297 aa17.63■□□□□ 0.41
CDKN3-209ENST00000556102 TEP1Q99973 2627 aaKnown RBP17.62■□□□□ 0.41
CDKN3-209ENST00000556102 IGKV3D-11A0A0A0MRZ8 115 aa17.62■□□□□ 0.41
CDKN3-209ENST00000556102 SNRPB2P08579 225 aaKnown RBP17.62■□□□□ 0.41
CDKN3-209ENST00000556102 ZNF24P17028 368 aa17.62■□□□□ 0.41
CDKN3-209ENST00000556102 MAOAP21397 527 aa17.62■□□□□ 0.41
CDKN3-209ENST00000556102 CYB561P49447 251 aa17.62■□□□□ 0.41
CDKN3-209ENST00000556102 HYAL2Q12891 473 aa17.62■□□□□ 0.41
CDKN3-209ENST00000556102 RBBP5Q15291 538 aaKnown RBP17.62■□□□□ 0.41
CDKN3-209ENST00000556102 ARMC2Q8NEN0 867 aa17.62■□□□□ 0.41
CDKN3-209ENST00000556102 NFAM1Q8NET5 270 aaPredicted RBP17.62■□□□□ 0.41
CDKN3-209ENST00000556102 ANKRD7Q92527 254 aa17.62■□□□□ 0.41
CDKN3-209ENST00000556102 PWWP2AQ96N64 755 aa17.62■□□□□ 0.41
CDKN3-209ENST00000556102 WDR83Q9BRX9 315 aaKnown RBP17.62■□□□□ 0.41
CDKN3-209ENST00000556102 KLHL31Q9H511 634 aa17.62■□□□□ 0.41
CDKN3-209ENST00000556102 SLC22A14Q9Y267 594 aa17.62■□□□□ 0.41
CDKN3-209ENST00000556102 TEX264Q9Y6I9 313 aa17.62■□□□□ 0.41
CDKN3-209ENST00000556102 KCNE2Q9Y6J6 123 aa17.62■□□□□ 0.41
CDKN3-209ENST00000556102 PDZD2O15018 2839 aa17.62■□□□□ 0.41
CDKN3-209ENST00000556102 SERPINA6P08185 405 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 ABOP16442 354 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 TRHRP34981 398 aaPredicted RBP17.61■□□□□ 0.41
CDKN3-209ENST00000556102 HLCSP50747 726 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 CDKL1Q00532 357 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 FRG1Q14331 258 aaKnown RBP17.61■□□□□ 0.41
CDKN3-209ENST00000556102 ZNF227Q86WZ6 799 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 CA13Q8N1Q1 262 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 ARMC10Q8N2F6 343 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 NKAPQ8N5F7 415 aaKnown RBP17.61■□□□□ 0.41
CDKN3-209ENST00000556102 CPSF7Q8N684 471 aaKnown RBP17.61■□□□□ 0.41
CDKN3-209ENST00000556102 CREB3L4Q8TEY5 395 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 TMEM125Q96AQ2 219 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 DEFB126Q9BYW3 111 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 RHBGQ9H310 441 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 GPAMQ9HCL2 828 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 NECTIN3Q9NQS3 549 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 ZFATQ9P243 1243 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 MMACHCQ9Y4U1 282 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 DCHS2Q6V1P9 2916 aa17.61■□□□□ 0.41
CDKN3-209ENST00000556102 NPEPPSL1A6NEC2 478 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 C4orf51C9J302 202 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 CDC7O00311 574 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 FCHO1O14526 889 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 ZSCAN12O43309 604 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 CLDN14O95500 239 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 ITGA8P53708 1063 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 MGAT5Q09328 741 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 TOR1AIP1Q5JTV8 583 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 RNFT1Q5M7Z0 435 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 SYDE1Q6ZW31 735 aaPredicted RBP17.6■□□□□ 0.41
CDKN3-209ENST00000556102 CHERPQ8IWX8 916 aaKnown RBP17.6■□□□□ 0.41
CDKN3-209ENST00000556102 POGLUT1Q8NBL1 392 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 MTFMTQ96DP5 389 aaKnown RBP17.6■□□□□ 0.41
CDKN3-209ENST00000556102 PHF12Q96QT6 1004 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 EGFL8Q99944 293 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 TRIM8Q9BZR9 551 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 AICDAQ9GZX7 198 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 OARD1Q9Y530 152 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 PSAT1Q9Y617 370 aa17.6■□□□□ 0.41
CDKN3-209ENST00000556102 FAM95CA0A1B0GW59 222 aa17.59■□□□□ 0.41
CDKN3-209ENST00000556102 A8MUA0 341 aa17.59■□□□□ 0.41
CDKN3-209ENST00000556102 TCP1P17987 556 aaKnown RBP17.59■□□□□ 0.41
CDKN3-209ENST00000556102 SAT1P21673 171 aa17.59■□□□□ 0.41
CDKN3-209ENST00000556102 HNMTP50135 292 aa17.59■□□□□ 0.41
CDKN3-209ENST00000556102 ARL4CP56559 192 aa17.59■□□□□ 0.41
CDKN3-209ENST00000556102 STXBP1P61764 594 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms