RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PRAMEF17Q5VTA0 474 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 KLHDC10Q6PID8 442 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 Q6ZVU0 165 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 CIR1Q86X95 450 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-216ENST00000556083 NINJ1Q92982 152 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 LRCH3Q96II8 777 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 ABCG8Q9H221 673 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 CCSER2Q9H7U1 834 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 PRTFDC1Q9NRG1 225 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 ZDHHC7Q9NXF8 308 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 MAU2Q9Y6X3 613 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 DLGAP1O14490 977 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 EI24O14681 340 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 GKN3PP0CG01 181 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 RPL17P18621 184 aaKnown RBP10.36□□□□□ -0.75
ACTN1-216ENST00000556083 HNRNPKP61978 463 aaKnown RBP eCLIP10.36□□□□□ -0.75
ACTN1-216ENST00000556083 NFATC2Q13469 925 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 GPR153Q6NV75 609 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 SHQ1Q6PI26 577 aaKnown RBP10.36□□□□□ -0.75
ACTN1-216ENST00000556083 PLXDC1Q8IUK5 500 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 HORMAD2Q8N7B1 307 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 YIPF7Q8N8F6 280 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 ATP6V1C2Q8NEY4 427 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 ZNF689Q96CS4 500 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-216ENST00000556083 PKP4Q99569 1192 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 ORAI3Q9BRQ5 295 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 MMP27Q9H306 513 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 B4GALT6Q9UBX8 382 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 DKKL1Q9UK85 242 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 PLCL2Q9UPR0 1127 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 TPD52L2O43399 206 aaKnown RBP10.36□□□□□ -0.75
ACTN1-216ENST00000556083 YES1P07947 543 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 PEX2P28328 305 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 SERTAD2Q14140 314 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 PTGR1Q14914 329 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 GPR68Q15743 365 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 C2orf27AQ580R0 203 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 SLC51AQ86UW1 340 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 MRPL41Q8IXM3 137 aaKnown RBP10.36□□□□□ -0.75
ACTN1-216ENST00000556083 PLD6Q8N2A8 252 aaKnown RBP10.36□□□□□ -0.75
ACTN1-216ENST00000556083 OR2L8Q8NGY9 312 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 SIGLEC10Q96LC7 697 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 SLC7A8Q9UHI5 535 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 SLC7A11Q9UPY5 501 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 ALG5Q9Y673 324 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 LOC730098B7Z3J9 87 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 E7ESA3 106 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 PRKD3O94806 890 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 JMJD7P0C870 316 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 CLUP10909 449 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 EDNRBP24530 442 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 HERV-K104P61576 105 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 RAB39AQ14964 217 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 ZNF678Q5SXM1 525 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 SH3PXD2AQ5TCZ1 1133 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 TXNDC8Q6A555 127 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 IQCF2Q8IXL9 164 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 ARMC10Q8N2F6 343 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 HPS1Q92902 700 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 SMARCD2Q92925 531 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 PGAP3Q96FM1 320 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-216ENST00000556083 SIRPGQ9P1W8 387 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 LOC100130705A0A1B0GUX0 176 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 CPSF4LA6NMK7 179 aaKnown RBP10.35□□□□□ -0.75
ACTN1-216ENST00000556083 OAZ2O95190 189 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 HEXBP07686 556 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 JUPP14923 745 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 TIA1P31483 386 aaKnown RBP eCLIP10.35□□□□□ -0.751e-9■■■■■ 27.3
ACTN1-216ENST00000556083 PREPP48147 710 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 HSD11B2P80365 405 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 OR4F3Q6IEY1 312 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 MARCH9Q86YJ5 346 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 C2orf73Q8N5S3 287 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-216ENST00000556083 MS4A15Q8N5U1 240 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 OR6C4Q8NGE1 309 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 OR8J1Q8NGP2 316 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.35□□□□□ -0.75
ACTN1-216ENST00000556083 NELFAQ9H3P2 528 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 PELI2Q9HAT8 420 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 KLHL21Q9UJP4 597 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 MYO5BQ9ULV0 1848 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 CPED1A4D0V7 1026 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 MEGF11A6BM72 1044 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 SLC22A31A6NKX4 558 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-216ENST00000556083 UGT1A9O60656 530 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 ABCB7O75027 752 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 BCHEP06276 602 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 DBIP07108 87 aaKnown RBP10.35□□□□□ -0.75
ACTN1-216ENST00000556083 GNAO1P09471 354 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 UGT1A6P19224 532 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 IL1R2P27930 398 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 CHRNA4P43681 627 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 CTBP2P56545 445 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 WDR4P57081 412 aaKnown RBP10.35□□□□□ -0.75
ACTN1-216ENST00000556083 DCDC1P59894 354 aa10.35□□□□□ -0.75
ACTN1-216ENST00000556083 KCTD19Q17RG1 926 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-216ENST00000556083 KHDC1Q4VXA5 237 aaKnown RBP10.35□□□□□ -0.75
ACTN1-216ENST00000556083 GTF2IRD2BQ6EKJ0 949 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms