RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 TEAD2Q15562 447 aa4.71□□□□□ -1.66
VRK1-205ENST00000555402 SLC27A4Q6P1M0 643 aa4.71□□□□□ -1.66
VRK1-205ENST00000555402 TATDN1Q6P1N9 297 aa4.71□□□□□ -1.66
VRK1-205ENST00000555402 CNSTQ6PJW8 725 aa4.71□□□□□ -1.66
VRK1-205ENST00000555402 C15orf52Q6ZUT6 534 aaKnown RBP4.71□□□□□ -1.66
VRK1-205ENST00000555402 BTN2A1Q7KYR7 527 aa4.71□□□□□ -1.66
VRK1-205ENST00000555402 TRMT11Q7Z4G4 463 aaKnown RBP4.71□□□□□ -1.66
VRK1-205ENST00000555402 TMEM99Q8N816 258 aa4.71□□□□□ -1.66
VRK1-205ENST00000555402 RNF149Q8NC42 400 aa4.71□□□□□ -1.66
VRK1-205ENST00000555402 SAP25Q8TEE9 199 aa4.71□□□□□ -1.66
VRK1-205ENST00000555402 RUFY1Q96T51 708 aa4.71□□□□□ -1.66
VRK1-205ENST00000555402 UBAC1Q9BSL1 405 aa4.71□□□□□ -1.66
VRK1-205ENST00000555402 MAN2C1Q9NTJ4 1040 aa4.71□□□□□ -1.66
VRK1-205ENST00000555402 ZCCHC3Q9NUD5 404 aaKnown RBP4.71□□□□□ -1.66
VRK1-205ENST00000555402 IL19Q9UHD0 177 aa4.71□□□□□ -1.66
VRK1-205ENST00000555402 SATB2Q9UPW6 733 aa4.71□□□□□ -1.66
VRK1-205ENST00000555402 TCF19Q9Y242 345 aa4.71□□□□□ -1.66
VRK1-205ENST00000555402 KCNK6Q9Y257 313 aa4.71□□□□□ -1.66
VRK1-205ENST00000555402 SPAG9O60271 1321 aaKnown RBP4.71□□□□□ -1.66
VRK1-205ENST00000555402 TMEM129A0AVI4 362 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 ATP6V1G1O75348 118 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 SAP30O75446 220 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 PRDM1O75626 825 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 PAK4O96013 591 aaPredicted RBP4.7□□□□□ -1.66
VRK1-205ENST00000555402 UGT1A6P19224 532 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 TYMPP19971 482 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 AADACP22760 399 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 CTNNA2P26232 953 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 PDE7AQ13946 482 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 PKN2Q16513 984 aaKnown RBP4.7□□□□□ -1.66
VRK1-205ENST00000555402 DUSP5Q16690 384 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 LRRC37A5PQ49AS3 106 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 LEKR1Q6ZMV7 388 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 MEX3BQ6ZN04 569 aaKnown RBP4.7□□□□□ -1.66
VRK1-205ENST00000555402 C17orf107Q6ZR85 190 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 PTAR1Q7Z6K3 402 aaPredicted RBP4.7□□□□□ -1.66
VRK1-205ENST00000555402 ZC3H3Q8IXZ2 948 aaKnown RBP4.7□□□□□ -1.66
VRK1-205ENST00000555402 OR10G8Q8NGN5 311 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 MAGED4Q96JG8 741 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 CDHR1Q96JP9 859 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 SPATA13Q96N96 652 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 NAP1L3Q99457 506 aaPredicted RBP4.7□□□□□ -1.66
VRK1-205ENST00000555402 IL12RB2Q99665 862 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 FAM213AQ9BRX8 229 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 SPXQ9BT56 116 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 FUCA2Q9BTY2 467 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 LRRC2Q9BYS8 371 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 SDF2L1Q9HCN8 221 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 ZNF71Q9NQZ8 489 aaPredicted RBP4.7□□□□□ -1.66
VRK1-205ENST00000555402 PRMT8Q9NR22 394 aaPredicted RBP4.7□□□□□ -1.66
VRK1-205ENST00000555402 DBF4Q9UBU7 674 aaPredicted RBP4.7□□□□□ -1.66
VRK1-205ENST00000555402 FOXA2Q9Y261 457 aaPredicted RBP4.7□□□□□ -1.66
VRK1-205ENST00000555402 WDR37Q9Y2I8 494 aa4.7□□□□□ -1.66
VRK1-205ENST00000555402 STRAPQ9Y3F4 350 aaKnown RBP4.7□□□□□ -1.66
VRK1-205ENST00000555402 ARID2Q68CP9 1835 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 MSGN1A6NI15 193 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 ZNF732B4DXR9 585 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 SLC1A7O00341 560 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 ZNF195O14628 629 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 CHUKO15111 745 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 PSMD3O43242 534 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 REC8O95072 547 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 CHRNGP07510 517 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 ABHD2P08910 425 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 GAP43P17677 238 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 OR3A2P47893 321 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 SLC12A3P55017 1021 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 CASP9P55211 416 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 HUNKP57058 714 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 CEACAM7Q14002 265 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 FAM53AQ6NSI3 398 aaPredicted RBP4.69□□□□□ -1.66
VRK1-205ENST00000555402 PSRC1Q6PGN9 363 aaPredicted RBP4.69□□□□□ -1.66
VRK1-205ENST00000555402 HOGA1Q86XE5 327 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 LSMEM2Q8N112 164 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 ZNF619Q8N2I2 560 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 CCDC185Q8N715 623 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 OR5AP2Q8NGF4 316 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 OR6S1Q8NH40 331 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 URGCPQ8TCY9 931 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 SMAP2Q8WU79 429 aaPredicted RBP4.69□□□□□ -1.66
VRK1-205ENST00000555402 HAS2Q92819 552 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 BPIFA2Q96DR5 249 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 RUNDC3BQ96NL0 473 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 FSD1Q9BTV5 496 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 TEX13AQ9BXU3 409 aaPredicted RBP4.69□□□□□ -1.66
VRK1-205ENST00000555402 TSPYL1Q9H0U9 437 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 ABCG4Q9H172 646 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 C3orf14Q9HBI5 128 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 GPN1Q9HCN4 374 aaPredicted RBP4.69□□□□□ -1.66
VRK1-205ENST00000555402 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.69□□□□□ -1.66
VRK1-205ENST00000555402 TEX264Q9Y6I9 313 aa4.69□□□□□ -1.66
VRK1-205ENST00000555402 A0A087WW49 117 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 A0A087WZ39 114 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 GTPBP10A4D1E9 387 aaKnown RBP4.68□□□□□ -1.66
VRK1-205ENST00000555402 KRT87PA6NCN2 255 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 SLC15A5A6NIM6 579 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 HHLA1C9JL84 531 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 MLNRO43193 412 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 SEC22BO75396 215 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms