RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 AKIRIN1Q9H9L7 192 aaPredicted RBP12.04□□□□□ -0.48
SYNE2-219ENST00000555323 ANKHQ9HCJ1 492 aa12.04□□□□□ -0.48
SYNE2-219ENST00000555323 LHX9Q9NQ69 397 aa12.04□□□□□ -0.48
SYNE2-219ENST00000555323 NMRK1Q9NWW6 199 aa12.04□□□□□ -0.48
SYNE2-219ENST00000555323 SIRT5Q9NXA8 310 aa12.04□□□□□ -0.48
SYNE2-219ENST00000555323 CCL27Q9Y4X3 112 aa12.04□□□□□ -0.48
SYNE2-219ENST00000555323 C4orf51C9J302 202 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 ERI3O43414 337 aaKnown RBP12.03□□□□□ -0.48
SYNE2-219ENST00000555323 RAD1O60671 282 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 ABCB7O75027 752 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 CRCPO75575 148 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 SCELO95171 688 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 ALBP02768 609 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 CCNYL3P0C7X3 344 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 ZNF888P0CJ79 500 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-219ENST00000555323 LIPCP11150 499 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 PIM1P11309 404 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-219ENST00000555323 AGXTP21549 392 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 PRPH2P23942 346 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 AVPR1BP47901 424 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 HTR6P50406 440 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 SKP1P63208 163 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 FOXK2Q01167 660 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 TGM3Q08188 693 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 TBL3Q12788 808 aaKnown RBP12.03□□□□□ -0.48
SYNE2-219ENST00000555323 DDX39BQ13838 428 aaKnown RBP12.03□□□□□ -0.48
SYNE2-219ENST00000555323 NKAIN1Q4KMZ8 207 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 SGO1Q5FBB7 561 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 FAM219BQ5XKK7 198 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 TRIM40Q6P9F5 258 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 Q6ZSR9 355 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 MED25Q71SY5 747 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 ZFAND4Q86XD8 727 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 PDSS2Q86YH6 399 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 GALNT6Q8NCL4 622 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 SNIP1Q8TAD8 396 aaKnown RBP12.03□□□□□ -0.48
SYNE2-219ENST00000555323 FAM76AQ8TAV0 307 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 LRRC8CQ8TDW0 803 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 DYDC1Q8WWB3 177 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 RGMAQ96B86 450 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 C11orf24Q96F05 449 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-219ENST00000555323 METTL2AQ96IZ6 378 aaKnown RBP12.03□□□□□ -0.48
SYNE2-219ENST00000555323 C7orf26Q96N11 449 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 KCNC2Q96PR1 638 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 C17orf62Q9BQA9 187 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 CENPKQ9BS16 269 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 NPLQ9BXD5 320 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-219ENST00000555323 ZNF717Q9BY31 904 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-219ENST00000555323 ACPTQ9BZG2 426 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 ROGDIQ9GZN7 287 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 TUBB1Q9H4B7 451 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 ZNF304Q9HCX3 659 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 SLC22A11Q9NSA0 550 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 AHSPQ9NZD4 102 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 VPS29Q9UBQ0 182 aa12.03□□□□□ -0.48
SYNE2-219ENST00000555323 IGLV3-12A0A075B6K2 115 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 A0A088AWK7 358 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 A0A0A6YYC8 382 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-219ENST00000555323 TEX51A0A1B0GUA7 166 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 TMEM233B4DJY2 109 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 I3L1I5 382 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-219ENST00000555323 SLC28A1O00337 649 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 PLPP1O14494 284 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 TERTO14746 1132 aaKnown RBP12.02□□□□□ -0.49
SYNE2-219ENST00000555323 KLHL18O94889 574 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 CHEK2O96017 543 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 CD63P08962 238 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 ZNF10P21506 573 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-219ENST00000555323 BSGP35613 385 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 OR1D4P47884 311 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 PLA2G16P53816 162 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 MTTPP55157 894 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 RAB8AP61006 207 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 BTN3A2P78410 334 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 DSG2Q14126 1118 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 DEFB134Q4QY38 66 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 C1orf189Q5VU69 101 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 OR4C11Q6IEV9 310 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 LCN10Q6JVE6 187 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 MRPL14Q6P1L8 145 aaKnown RBP12.02□□□□□ -0.49
SYNE2-219ENST00000555323 OVCH1Q7RTY7 1134 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 PRSS41Q7RTY9 318 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 METTL4Q8N3J2 472 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 ZCCHC7Q8N3Z6 543 aaKnown RBP12.02□□□□□ -0.49
SYNE2-219ENST00000555323 DTWD1Q8N5C7 304 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 AMER3Q8N944 861 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 OR9A4Q8NGU2 314 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 ZCCHC10Q8TBK6 192 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 CHTF18Q8WVB6 975 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 TWIST2Q8WVJ9 160 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 FAR2Q96K12 515 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 SERINC2Q96SA4 455 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 SLC26A1Q9H2B4 701 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 CCDC134Q9H6E4 229 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 CCDC86Q9H6F5 360 aaKnown RBP12.02□□□□□ -0.49
SYNE2-219ENST00000555323 DDX31Q9H8H2 851 aaKnown RBP12.02□□□□□ -0.49
SYNE2-219ENST00000555323 NDOR1Q9UHB4 597 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 ADAM29Q9UKF5 820 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 SSUH2Q9Y2M2 353 aa12.02□□□□□ -0.49
SYNE2-219ENST00000555323 NAALAD2Q9Y3Q0 740 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms