RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 REXO4Q9GZR2 422 aaKnown RBP10.06□□□□□ -0.8
TMEM260-206ENST00000555046 CENPHQ9H3R5 247 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 ACTL8Q9H568 366 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 AKIRIN1Q9H9L7 192 aaPredicted RBP10.06□□□□□ -0.8
TMEM260-206ENST00000555046 CPNE5Q9HCH3 593 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 SSU72Q9NP77 194 aaKnown RBP10.06□□□□□ -0.8
TMEM260-206ENST00000555046 SEMA3GQ9NS98 782 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 NMRK1Q9NWW6 199 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 AHSPQ9NZD4 102 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 TRPC4Q9UBN4 977 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 PCTPQ9UKL6 214 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 ZNF490Q9ULM2 529 aaPredicted RBP10.06□□□□□ -0.8
TMEM260-206ENST00000555046 SNX6Q9UNH7 406 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 MAU2Q9Y6X3 613 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 A0A0A6YYC8 382 aaPredicted RBP10.05□□□□□ -0.8
TMEM260-206ENST00000555046 LRIT2A6NDA9 550 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 VSTM2BA6NLU5 285 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 A8MT66 165 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 I3L1I5 382 aaPredicted RBP10.05□□□□□ -0.8
TMEM260-206ENST00000555046 FOXE1O00358 373 aaPredicted RBP10.05□□□□□ -0.8
TMEM260-206ENST00000555046 PEX12O00623 359 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 NKX2-8O15522 239 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 FOXS1O43638 330 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 KLHL41O60662 606 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 SIX3O95343 332 aaPredicted RBP10.05□□□□□ -0.8
TMEM260-206ENST00000555046 PROCP04070 461 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 PCNAP12004 261 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 EPORP19235 508 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 RRADP55042 308 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 PKNOX1P55347 436 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 CLCQ05315 142 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 LY6DQ14210 128 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 ERV3-1Q14264 604 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 SLC9A5Q14940 896 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 RBBP7Q16576 425 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 C4orf17Q53FE4 359 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 ZNF678Q5SXM1 525 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 TRIM40Q6P9F5 258 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 C4orf33Q8N1A6 199 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 ARHGEF39Q8N4T4 335 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 AFAP1L2Q8N4X5 818 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 KCT2Q8NC54 265 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 OR7G3Q8NG95 312 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 CREB3L4Q8TEY5 395 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 APOBEC4Q8WW27 367 aaKnown RBP10.05□□□□□ -0.8
TMEM260-206ENST00000555046 GAL3ST3Q96A11 431 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 L3HYPDHQ96EM0 354 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 WBP1Q96G27 269 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 CNDP1Q96KN2 507 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 C10orf90Q96M02 699 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 FER1L6-AS2Q96M78 137 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 ZIM3Q96PE6 472 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 KCNC2Q96PR1 638 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 OR1F2PQ96R84 312 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 TBCDQ9BTW9 1192 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 TRMOQ9BU70 441 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 NPLQ9BXD5 320 aaPredicted RBP10.05□□□□□ -0.8
TMEM260-206ENST00000555046 SLC6A16Q9GZN6 736 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 G3BP2Q9UN86 482 aaKnown RBP10.05□□□□□ -0.8
TMEM260-206ENST00000555046 POLHQ9Y253 713 aa10.05□□□□□ -0.8
TMEM260-206ENST00000555046 PTRH2Q9Y3E5 179 aaKnown RBP10.05□□□□□ -0.8
TMEM260-206ENST00000555046 COL27A1Q8IZC6 1860 aaPredicted RBP10.04□□□□□ -0.8
TMEM260-206ENST00000555046 SPENQ96T58 3664 aaKnown RBP10.04□□□□□ -0.8
TMEM260-206ENST00000555046 IGLV3-12A0A075B6K2 115 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 SYNDIG1LA6NDD5 238 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 PSMD12O00232 456 aaPredicted RBP10.04□□□□□ -0.8
TMEM260-206ENST00000555046 P2RX6O15547 441 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 GALR3O60755 368 aaPredicted RBP10.04□□□□□ -0.8
TMEM260-206ENST00000555046 TRIM13O60858 407 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 KLF7O75840 302 aaPredicted RBP10.04□□□□□ -0.8
TMEM260-206ENST00000555046 KLHL18O94889 574 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 KRT6AP02538 564 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 KRT6BP04259 564 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 CAPN1P07384 714 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 RPS17P08708 135 aaKnown RBP10.04□□□□□ -0.8
TMEM260-206ENST00000555046 SBK3P0C264 359 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 ZGLP1P0C6A0 271 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 ZNF888P0CJ79 500 aaPredicted RBP10.04□□□□□ -0.8
TMEM260-206ENST00000555046 POU3F2P20265 443 aaPredicted RBP10.04□□□□□ -0.8
TMEM260-206ENST00000555046 JAK1P23458 1154 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 F8A1P23610 371 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 MMP11P24347 488 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 TSFMP43897 325 aaKnown RBP10.04□□□□□ -0.8
TMEM260-206ENST00000555046 KRT6CP48668 564 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 CYP4F2P78329 520 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 BTN3A2P78410 334 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 CDC20Q12834 499 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 LCP2Q13094 533 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 NKG7Q16617 165 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 CPSF6Q16630 551 aaKnown RBP eCLIP10.04□□□□□ -0.8
TMEM260-206ENST00000555046 AP5B1Q2VPB7 878 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 GGTA1PQ4G0N0 100 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 TOR1AIP1Q5JTV8 583 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 DEPDC1Q5TB30 811 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 LCN10Q6JVE6 187 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 BORAQ6PGQ7 559 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 FAM198BQ6UWH4 519 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 MED25Q71SY5 747 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 HDXQ7Z353 690 aa10.04□□□□□ -0.8
TMEM260-206ENST00000555046 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms