RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 MKRN2Q9H000 416 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 DEFB127Q9H1M4 99 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SYNPO2LQ9H987 977 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PAK5Q9P286 719 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 C5AR2Q9P296 337 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 H3BNH8 94 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PGRMC2O15173 223 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ENTPD3O75355 529 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PAHP00439 452 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 GP1BBP13224 206 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 DCDC1P59894 354 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SLBPQ14493 270 aaKnown RBP eCLIP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TRMT5Q32P41 509 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 FUKQ8N0W3 1084 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SLC47A1Q96FL8 570 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PANX1Q96RD7 426 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 GPR21Q99679 349 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TCF7L2Q9NQB0 619 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TRNAU1APQ9NX07 287 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 GSTK1Q9Y2Q3 226 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 HMGXB3Q12766 1538 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 A0A088AWK7 358 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 KDM4FA0A1W2PPD8 638 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 AQP7P3A6NL99 342 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 C22orf31O95567 290 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 LDLRP01130 860 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF10P21506 573 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MAP3K8P41279 467 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 STXBP5Q5T5C0 1151 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SWT1Q5T5J6 900 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 RAB12Q6IQ22 244 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 OR51L1Q8NGJ5 315 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 IL1F10Q8WWZ1 152 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 CCDC74BQ96LY2 380 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TNFRSF10DQ9UBN6 386 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PADI3Q9ULW8 664 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PCDHB1Q9Y5F3 818 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TSTD3H0UI37 97 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TIMP2P16035 220 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MC2RQ01718 297 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PTPN11Q06124 597 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF616Q08AN1 781 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 NOGQ13253 232 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MEP1AQ16819 746 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 GCNT6Q5T4J0 391 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TNFAIP8L1Q8WVP5 186 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF75CPQ92670 426 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ITFG2Q969R8 447 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 COPS8Q99627 209 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 FUZQ9BT04 418 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 C9orf16Q9BUW7 83 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ARL8BQ9NVJ2 186 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 NRKQ7Z2Y5 1582 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF705GA8MUZ8 300 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PRLP01236 227 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 CHRNB1P11230 501 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TFEBP19484 476 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 CRABP2P29373 138 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 EIF2DP41214 584 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MBTPS1Q14703 1052 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SLC18A3Q16572 532 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 NDUFA9Q16795 377 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 LINC00523Q86TU6 105 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 NKAPQ8N5F7 415 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 FAM71F1Q96KD3 344 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 R3HDMLQ9H3Y0 253 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 GRHL1Q9NZI5 618 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 VAPAQ9P0L0 249 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MYO3AQ8NEV4 1616 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 A0A1W2PQ09 198 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 A0A1W2PQC6 194 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 DCDC2BA2VCK2 349 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 B3GALT2O43825 422 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 VDRP11473 427 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TFPI2P48307 235 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ENOSF1Q7L5Y1 443 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MYDGFQ969H8 173 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SLC38A2Q96QD8 506 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PANX3Q96QZ0 392 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 GPR34Q9UPC5 381 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 FLRT2O43155 660 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 GJB5O95377 273 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 DCNP07585 359 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PTPN2P17706 415 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SOX3P41225 446 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ZFP1Q6P2D0 407 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SLC36A4Q6YBV0 504 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF34Q8IZ26 560 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 RSRP1Q9BUV0 290 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 CPNE5Q9HCH3 593 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MRPS17Q9Y2R5 130 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PCDHA2Q9Y5H9 948 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PCYT1BQ9Y5K3 369 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TULP2O00295 520 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 HLA-FP30511 346 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 CLCN2P51788 898 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PPP2CAP67775 309 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 CHIT1Q13231 466 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 CCDC36Q8IYA8 594 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MAPK15Q8TD08 544 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms