RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 PLPP5Q8NEB5 264 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 CPT1CQ8TCG5 803 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 KCTD4Q8WVF5 259 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 SLC44A1Q8WWI5 657 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 METTL21AQ8WXB1 218 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 IFT81Q8WYA0 676 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 PSMF1Q92530 271 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 GAL3ST3Q96A11 431 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 NXNL1Q96CM4 212 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 TRIM44Q96DX7 344 aaPredicted RBP7.1□□□□□ -1.27
LINC00640-201ENST00000554409 PTCD3Q96EY7 689 aaKnown RBP7.1□□□□□ -1.27
LINC00640-201ENST00000554409 IMMP1LQ96LU5 166 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 AGAP4Q96P64 663 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 LMF1Q96S06 567 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 WDR77Q9BQA1 342 aaPredicted RBP7.1□□□□□ -1.27
LINC00640-201ENST00000554409 EFCAB11Q9BUY7 163 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 CD244Q9BZW8 370 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 EPS8L2Q9H6S3 715 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 ALG9Q9H6U8 611 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 ZBTB20Q9HC78 741 aaPredicted RBP7.1□□□□□ -1.27
LINC00640-201ENST00000554409 SNX15Q9NRS6 342 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 LANCL2Q9NS86 450 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 C19orf25Q9UFG5 118 aaPredicted RBP7.1□□□□□ -1.27
LINC00640-201ENST00000554409 ZNF180Q9UJW8 692 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 SHANK1Q9Y566 2161 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 A0A087WUV0 522 aaPredicted RBP7.09□□□□□ -1.27
LINC00640-201ENST00000554409 A0A096LPK6 155 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 CLEC18AA5D8T8 446 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 LRIT2A6NDA9 550 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 ZNF860A6NHJ4 632 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 TTLL8A6PVC2 850 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 MAGEB17A8MXT2 336 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 SUPT3HB4E1H0 165 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 C4orf51C9J302 202 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 K7EPI3 171 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 LCE2BO14633 110 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 CHST10O43529 356 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 KLK8O60259 260 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 CCNT2O60583 730 aaKnown RBP7.09□□□□□ -1.27
LINC00640-201ENST00000554409 SUPT3HO75486 399 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 CLEC3AO75596 197 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 WFS1O76024 890 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 ACSL3O95573 720 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 SERPIND1P05546 499 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 FHP07954 510 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 INHBAP08476 426 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 ABHD2P08910 425 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 MTHFD2P13995 350 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 EPORP19235 508 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 CD22P20273 847 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 CNTFP26441 200 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 GMPRP36959 345 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 CASP2P42575 452 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 MAGEA12P43365 314 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 SERPINB9P50453 376 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 STXBP1P61764 594 aaKnown RBP7.09□□□□□ -1.27
LINC00640-201ENST00000554409 IRF9Q00978 393 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 RHAGQ02094 409 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 DOC2AQ14183 400 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 NAA30Q147X3 362 aaPredicted RBP7.09□□□□□ -1.27
LINC00640-201ENST00000554409 SETDB1Q15047 1291 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 ACAP2Q15057 778 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 INPP5JQ15735 1006 aaPredicted RBP7.09□□□□□ -1.27
LINC00640-201ENST00000554409 UAP1Q16222 522 aaPredicted RBP7.09□□□□□ -1.27
LINC00640-201ENST00000554409 IGFBP7Q16270 282 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 PLEKHN1Q494U1 663 aaPredicted RBP7.09□□□□□ -1.27
LINC00640-201ENST00000554409 MINDY4Q4G0A6 757 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 FBXO48Q5FWF7 155 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 TOR1AIP1Q5JTV8 583 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 MFSD4BQ5TF39 518 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 B3GNTL1Q67FW5 361 aaPredicted RBP7.09□□□□□ -1.27
LINC00640-201ENST00000554409 ZNF787Q6DD87 383 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 PLAG1Q6DJT9 500 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 METTL2BQ6P1Q9 378 aaKnown RBP7.09□□□□□ -1.27
LINC00640-201ENST00000554409 KLC3Q6P597 504 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 CLEC18BQ6UXF7 455 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 QSOX2Q6ZRP7 698 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 LANCL3Q6ZV70 420 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 VN1R5Q7Z5H4 357 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 CPEB2Q7Z5Q1 589 aaKnown RBP7.09□□□□□ -1.27
LINC00640-201ENST00000554409 ANKRD37Q7Z713 158 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 ATCAYQ86WG3 371 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 IQCKQ8N0W5 287 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 SHISA5Q8N114 240 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 SNX31Q8N9S9 440 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 CLEC18CQ8NCF0 446 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 GALNT11Q8NCW6 608 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 OR5T3Q8NGG3 340 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 HPS1Q92902 700 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 EXT2Q93063 718 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 ESAMQ96AP7 390 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 TBC1D20Q96BZ9 403 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 MS4A6EQ96DS6 147 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 PEX11GQ96HA9 241 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 GPR78Q96P69 363 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 CDK15Q96Q40 435 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 PAFAH2Q99487 392 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 NPLQ9BXD5 320 aaPredicted RBP7.09□□□□□ -1.27
LINC00640-201ENST00000554409 AICDAQ9GZX7 198 aa7.09□□□□□ -1.27
LINC00640-201ENST00000554409 RNF32Q9H0A6 362 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms