RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 EXT2Q93063 718 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 PNPLA2Q96AD5 504 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 C8orf44Q96CB5 159 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 MRRFQ96E11 262 aaKnown RBP12.35□□□□□ -0.43
SHMT2-211ENST00000554310 MOCOSQ96EN8 888 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 WDR34Q96EX3 536 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 OR1F2PQ96R84 312 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 ATOH8Q96SQ7 321 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 EFCAB11Q9BUY7 163 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 LHPPQ9H008 270 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 CCDC134Q9H6E4 229 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 CLK4Q9HAZ1 481 aaKnown RBP12.35□□□□□ -0.43
SHMT2-211ENST00000554310 ZNF160Q9HCG1 818 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 COPG2Q9UBF2 871 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 C19orf25Q9UFG5 118 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-211ENST00000554310 PTBP2Q9UKA9 531 aaKnown RBP12.35□□□□□ -0.43
SHMT2-211ENST00000554310 IKBKGQ9Y6K9 419 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 PTPN13Q12923 2485 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 SPENQ96T58 3664 aaKnown RBP12.34□□□□□ -0.43
SHMT2-211ENST00000554310 A0A096LPK6 155 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 IGHV1-45A0A0A0MS14 117 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 GMNCA6NCL1 334 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 SYCE1LA8MT33 242 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 SUPT3HB4E1H0 165 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 PYCARD-AS1I3L0S3 204 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 MASP2O00187 686 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 CLGNO14967 610 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 H2AFYO75367 372 aaKnown RBP12.34□□□□□ -0.43
SHMT2-211ENST00000554310 SUPT3HO75486 399 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 FAM107AO95990 144 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 ALDOAP04075 364 aaKnown RBP12.34□□□□□ -0.43
SHMT2-211ENST00000554310 C2P06681 752 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 SERPINA6P08185 405 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 ZNF888P0CJ79 500 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-211ENST00000554310 GCAP28676 217 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 SERPINB9P50453 376 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 STXBP1P61764 594 aaKnown RBP12.34□□□□□ -0.43
SHMT2-211ENST00000554310 AP2B1P63010 937 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 FOXK1P85037 733 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 EEF1A2Q05639 463 aaKnown RBP12.34□□□□□ -0.43
SHMT2-211ENST00000554310 RBBP5Q15291 538 aaKnown RBP12.34□□□□□ -0.43
SHMT2-211ENST00000554310 MINDY4Q4G0A6 757 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 NADK2Q4G0N4 442 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 DEFB134Q4QY38 66 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 MFSD4BQ5TF39 518 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 AGAP7PQ5VUJ5 663 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 SLC6A19Q695T7 634 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 JMJD6Q6NYC1 403 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-211ENST00000554310 KLC3Q6P597 504 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 TMEM205Q6UW68 189 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 TMIGD1Q6UXZ0 262 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 KBTBD2Q8IY47 623 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.34□□□□□ -0.43
SHMT2-211ENST00000554310 RBMXL3Q8N7X1 1067 aaKnown RBP12.34□□□□□ -0.43
SHMT2-211ENST00000554310 SNX31Q8N9S9 440 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 CREB3L4Q8TEY5 395 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 KCTD4Q8WVF5 259 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 ISL2Q96A47 359 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 AGAP4Q96P64 663 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 PAFAH2Q99487 392 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 MESP1Q9BRJ9 268 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 CD244Q9BZW8 370 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 VN1R1Q9GZP7 353 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 NT5DC2Q9H857 520 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 INTS9Q9NV88 658 aaKnown RBP12.34□□□□□ -0.43
SHMT2-211ENST00000554310 SENP1Q9P0U3 644 aa12.34□□□□□ -0.43
SHMT2-211ENST00000554310 ZNF860A6NHJ4 632 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 NDUFAB1O14561 156 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 CCNT2O60583 730 aaKnown RBP12.33□□□□□ -0.44
SHMT2-211ENST00000554310 JRKO75564 520 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 KRT38O76015 456 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 KLHL2O95198 593 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 SERPINA7P05543 415 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 JAK1P23458 1154 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 CNTFP26441 200 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 TYK2P29597 1187 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 GMPRP36959 345 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 MAGEA12P43365 314 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 AGTR2P50052 363 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 EFNA3P52797 238 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 IRF9Q00978 393 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 Q0VFX4 171 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 HYAL2Q12891 473 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 ACAP2Q15057 778 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 FBXO48Q5FWF7 155 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 XKR6Q5GH73 641 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 PAGE2BQ5JRK9 111 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 COLEC12Q5KU26 742 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 RIPOR1Q6ZS17 1223 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 TRABD2AQ86V40 505 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 PARP9Q8IXQ6 854 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 CYP4X1Q8N118 509 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 ZADH2Q8N4Q0 377 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 UTP15Q8TED0 518 aaKnown RBP12.33□□□□□ -0.44
SHMT2-211ENST00000554310 ZNF473Q8WTR7 871 aaKnown RBP12.33□□□□□ -0.44
SHMT2-211ENST00000554310 GAL3ST3Q96A11 431 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 NXNL1Q96CM4 212 aa12.33□□□□□ -0.44
SHMT2-211ENST00000554310 PTCD3Q96EY7 689 aaKnown RBP12.33□□□□□ -0.44
SHMT2-211ENST00000554310 THOC3Q96J01 351 aaKnown RBP12.33□□□□□ -0.44
SHMT2-211ENST00000554310 CCT8L2Q96SF2 557 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms