RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 PRDM9Q9NQV7 894 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 NSMCE4AQ9NXX6 385 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 LRFN1Q9P244 771 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 SCN2AQ99250 2005 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 CREBBPQ92793 2442 aa17.6■□□□□ 0.41
CPSF2-203ENST00000554290 ASPDHA6ND91 283 aa17.59■□□□□ 0.41
CPSF2-203ENST00000554290 NPEPPSL1A6NEC2 478 aa17.59■□□□□ 0.41
CPSF2-203ENST00000554290 H2AFYO75367 372 aaKnown RBP17.59■□□□□ 0.41
CPSF2-203ENST00000554290 BTG2P78543 158 aa17.59■□□□□ 0.41
CPSF2-203ENST00000554290 ILF2Q12905 390 aaKnown RBP17.59■□□□□ 0.41
CPSF2-203ENST00000554290 BNC2Q6ZN30 1099 aaPredicted RBP17.59■□□□□ 0.41
CPSF2-203ENST00000554290 FRA10AC1Q70Z53 315 aa17.59■□□□□ 0.41
CPSF2-203ENST00000554290 GALNTL5Q7Z4T8 443 aa17.59■□□□□ 0.41
CPSF2-203ENST00000554290 WDR83Q9BRX9 315 aaKnown RBP17.59■□□□□ 0.41
CPSF2-203ENST00000554290 UNKQ9C0B0 810 aaKnown RBP17.59■□□□□ 0.41
CPSF2-203ENST00000554290 RHBGQ9H310 441 aa17.59■□□□□ 0.41
CPSF2-203ENST00000554290 CTNNAL1Q9UBT7 734 aa17.59■□□□□ 0.41
CPSF2-203ENST00000554290 OARD1Q9Y530 152 aa17.59■□□□□ 0.41
CPSF2-203ENST00000554290 PSAT1Q9Y617 370 aa17.59■□□□□ 0.41
CPSF2-203ENST00000554290 FAM95CA0A1B0GW59 222 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 TCRBV16S1A1N1A0A5B0 115 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 SAGE2PA6NJ88 616 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 NPIPA5E9PKD4 350 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 SLC25A12O75746 678 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 NEURL1O76050 574 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 WISP2O76076 250 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 SEC31AO94979 1220 aaKnown RBP17.58■□□□□ 0.4
CPSF2-203ENST00000554290 SMIM10L1P0DMW3 83 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 GNAZP19086 355 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 MAOAP21397 527 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 CYB561P49447 251 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 SMSP52788 366 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 STXBP1P61764 594 aaKnown RBP17.58■□□□□ 0.4
CPSF2-203ENST00000554290 HYAL2Q12891 473 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 PDIA2Q13087 525 aaKnown RBP17.58■□□□□ 0.4
CPSF2-203ENST00000554290 MAPKAPK3Q16644 382 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 TOR1AIP1Q5JTV8 583 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.58■□□□□ 0.4
CPSF2-203ENST00000554290 ADAMTSL2Q86TH1 951 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 CREG2Q8IUH2 290 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 SPPL2CQ8IUH8 684 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 KIF2BQ8N4N8 673 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 FBXO36Q8NEA4 188 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 TTLQ8NG68 377 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 TMEM125Q96AQ2 219 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 SMIM10Q96HG1 83 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 FAR2Q96K12 515 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 FRMD6Q96NE9 622 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 TRIM51Q9BSJ1 452 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 NPIPA1Q9UND3 350 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 ZNF835Q9Y2P0 537 aa17.58■□□□□ 0.4
CPSF2-203ENST00000554290 IGKV3D-11A0A0A0MRZ8 115 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 EFCAB8A8MWE9 144 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 CCDC188H7C350 402 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 FCHO1O14526 889 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 ASNA1O43681 348 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 C1GALT1C1LP0DN25 315 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 PRF1P14222 555 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 HTR1EP28566 365 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 TPP2P29144 1249 aaPredicted RBP17.57■□□□□ 0.4
CPSF2-203ENST00000554290 PAFAH1B1P43034 410 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 SLC12A2P55011 1212 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 TAS2R39P59534 338 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 C3AR1Q16581 482 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 MCEMP1Q8IX19 187 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 CREB3L4Q8TEY5 395 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 CAPS2Q9BXY5 557 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 DEFB126Q9BYW3 111 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 TRIM31Q9BZY9 425 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 TSPAN10Q9H1Z9 355 aaPredicted RBP17.57■□□□□ 0.4
CPSF2-203ENST00000554290 KLHL31Q9H511 634 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 POPDC3Q9HBV1 291 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 GPAMQ9HCL2 828 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 MOCS1Q9NZB8 636 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 TINAGQ9UJW2 476 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 SAR1BQ9Y6B6 198 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 LRBAP50851 2863 aa17.57■□□□□ 0.4
CPSF2-203ENST00000554290 CTAGE15A4D2H0 777 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 NME2P1O60361 137 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 WDR47O94967 919 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 AGAP20933 346 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 NME2P22392 152 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 GSTM2P28161 218 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 GRNP28799 593 aaKnown RBP17.56■□□□□ 0.4
CPSF2-203ENST00000554290 HLCSP50747 726 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 MLF1P58340 268 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 GNG11P61952 73 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 BTN3A2P78410 334 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 ZNF460Q14592 562 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 TSNQ15631 228 aaKnown RBP17.56■□□□□ 0.4
CPSF2-203ENST00000554290 ZNF630Q2M218 657 aaPredicted RBP17.56■□□□□ 0.4
CPSF2-203ENST00000554290 TMIGD1Q6UXZ0 262 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 Q6ZPB1 254 aaPredicted RBP17.56■□□□□ 0.4
CPSF2-203ENST00000554290 CTAGE6Q86UF2 777 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 KRT78Q8N1N4 520 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 CA13Q8N1Q1 262 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 GHDCQ8N2G8 530 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 NFAM1Q8NET5 270 aaPredicted RBP17.56■□□□□ 0.4
CPSF2-203ENST00000554290 ANKRD49Q8WVL7 239 aa17.56■□□□□ 0.4
CPSF2-203ENST00000554290 GAL3ST3Q96A11 431 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms