RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 GPR17Q13304 367 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 EIF4EBP2Q13542 120 aaPredicted RBP5.72□□□□□ -1.49
VPS33B-203ENST00000554264 OXA1LQ15070 435 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 TYSND1Q2T9J0 566 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 PARP15Q460N3 678 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 TMEM196Q5HYL7 178 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 GPR158Q5T848 1215 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 MARC1Q5VT66 337 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 AGAP7PQ5VUJ5 663 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 MSANTD2Q6P1R3 559 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 AFTPHQ6ULP2 937 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 MSANTD1Q6ZTZ1 278 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 PAQR9Q6ZVX9 377 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 PRSS48Q7RTY5 328 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 ITIH5Q86UX2 942 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 ZFAND4Q86XD8 727 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 TMC8Q8IU68 726 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 ARHGAP12Q8IWW6 846 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 RIMKLAQ8IXN7 391 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 EID3Q8N140 333 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 CLEC4FQ8N1N0 589 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 THEM5Q8N1Q8 247 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 STK40Q8N2I9 435 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 FBXO39Q8N4B4 442 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 TEX26Q8N6G2 289 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 PTGR2Q8N8N7 351 aaPredicted RBP5.72□□□□□ -1.49
VPS33B-203ENST00000554264 ACVR1CQ8NER5 493 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 MAGEE2Q8TD90 523 aaPredicted RBP5.72□□□□□ -1.49
VPS33B-203ENST00000554264 PHF10Q8WUB8 498 aaKnown RBP5.72□□□□□ -1.49
VPS33B-203ENST00000554264 IPCEF1Q8WWN9 437 aaPredicted RBP5.72□□□□□ -1.49
VPS33B-203ENST00000554264 USP7Q93009 1102 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 PSMG2Q969U7 264 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 MUL1Q969V5 352 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 TADA1Q96BN2 335 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 ZFYVE19Q96K21 471 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 PPP3R2Q96LZ3 170 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 TRIB3Q96RU7 358 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 ZNF382Q96SR6 550 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 APOL2Q9BQE5 337 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 DCUN1D5Q9BTE7 237 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 CHID1Q9BWS9 393 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 SLC32A1Q9H598 525 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 ALG9Q9H6U8 611 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 SP140LQ9H930 580 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 OLA1Q9NTK5 396 aaKnown RBP5.72□□□□□ -1.49
VPS33B-203ENST00000554264 ASIC5Q9NY37 505 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 SCN3BQ9NY72 215 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 NUDT4Q9NZJ9 180 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 SELENONQ9NZV5 590 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 COX16Q9P0S2 106 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 ENPP5Q9UJA9 477 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 PCDHGB4Q9UN71 923 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 CDC14AQ9UNH5 594 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 UGT2A1Q9Y4X1 527 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 PCDHGB5Q9Y5G0 923 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 DOCK4Q8N1I0 1966 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 NYNRINQ9P2P1 1898 aaKnown RBP5.72□□□□□ -1.49
VPS33B-203ENST00000554264 MYO16Q9Y6X6 1858 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 ZFC3H1O60293 1989 aaKnown RBP5.71□□□□□ -1.49
VPS33B-203ENST00000554264 LOC285095A0A1B0GVY8 99 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 A0A1W2PPW3 197 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF99A8MXY4 864 aaPredicted RBP5.71□□□□□ -1.5
VPS33B-203ENST00000554264 HHLA1C9JL84 531 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 G3V2T6 193 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 FAM72CH0Y354 149 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 H0Y626 953 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 K7EPI3 171 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 M0QZQ0 153 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 M0R3G1 203 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 SLC16A6O15403 523 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 GPR42O15529 346 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 DPM1O60762 260 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 VPS26AO75436 327 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 PMPCBO75439 489 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 SUPT3HO75486 399 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 WDR47O94967 919 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 GABARAPO95166 117 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 APOL3O95236 402 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 TRIM16O95361 564 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 S100BP04271 92 aaPredicted RBP5.71□□□□□ -1.5
VPS33B-203ENST00000554264 IL6P05231 212 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 ITGAMP11215 1152 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 GGT1P19440 569 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 TYMPP19971 482 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 YWHAQP27348 245 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 GABRR2P28476 465 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 HALP42357 657 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 ABCG1P45844 678 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 PIK3CGP48736 1102 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 TTPAP49638 278 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 STC1P52823 247 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 ATXN3P54252 364 aaPredicted RBP5.71□□□□□ -1.5
VPS33B-203ENST00000554264 CDH15P55291 814 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 TSPY1Q01534 308 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.71□□□□□ -1.5
VPS33B-203ENST00000554264 LMAN2Q12907 356 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 ABRQ12979 859 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 RUNX3Q13761 415 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 KEAP1Q14145 624 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 VEPH1Q14D04 833 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms