RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 A0A088AWK7 358 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 K7EPI3 171 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 SCRG1O75711 98 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 ZBTB11O95625 1053 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-209ENST00000553659 KLK3P07288 261 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-209ENST00000553659 SNRPB2P08579 225 aaKnown RBP15.31■□□□□ 0.04
ACTN1-209ENST00000553659 TSPAN8P19075 237 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 CCR7P32248 378 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 GGT5P36269 586 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 NUDT2P50583 147 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 CCL11P51671 97 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 CCNG1P51959 295 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 PLOD1Q02809 727 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-209ENST00000553659 TBL3Q12788 808 aaKnown RBP15.31■□□□□ 0.04
ACTN1-209ENST00000553659 IL10RAQ13651 578 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 GPR19Q15760 415 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 NADK2Q4G0N4 442 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 XKR7Q5GH72 579 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 C1orf146Q5VVC0 180 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 CPZQ66K79 652 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 GOLGA7Q7Z5G4 137 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 OOSP2Q86WS3 158 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 TMEM126BQ8IUX1 230 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 DEFB107AQ8IZN7 70 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 CARFQ8N187 725 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 MIER2Q8N344 545 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 FBXW8Q8N3Y1 598 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 BEND7Q8N7W2 519 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-209ENST00000553659 PCYOX1LQ8NBM8 494 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 MR1Q95460 341 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 RHBDF1Q96CC6 855 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 TUBGCP3Q96CW5 907 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 ZNF501Q96CX3 271 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-209ENST00000553659 LRFN5Q96NI6 719 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 INSM2Q96T92 566 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-209ENST00000553659 SLC29A3Q9BZD2 475 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 PARVBQ9HBI1 364 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 IMP3Q9NV31 184 aaKnown RBP15.31■□□□□ 0.04
ACTN1-209ENST00000553659 TRPS1Q9UHF7 1281 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 SLC7A8Q9UHI5 535 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 MAP4K5Q9Y4K4 846 aa15.31■□□□□ 0.04
ACTN1-209ENST00000553659 CFAP20Q9Y6A4 193 aaKnown RBP15.31■□□□□ 0.04
ACTN1-209ENST00000553659 USP9XQ93008 2570 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-209ENST00000553659 DYTNA2CJ06 578 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 MGAT4DA6NG13 374 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 LRRC14BA6NHZ5 514 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 ARGFXA6NJG6 315 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 STK16O75716 305 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 PRR35P0CG20 571 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 PBLDP30039 288 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-209ENST00000553659 PRLHRP49683 370 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 AGTR2P50052 363 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 MTTPP55157 894 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 CHAF1BQ13112 559 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 KPNB1Q14974 876 aaKnown RBP15.3■□□□□ 0.04
ACTN1-209ENST00000553659 RPS6KA2Q15349 733 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 MMEL1Q495T6 779 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 TMTC4Q5T4D3 741 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 ARMC6Q6NXE6 501 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 BNC2Q6ZN30 1099 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-209ENST00000553659 UBE2R2Q712K3 238 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-209ENST00000553659 RP1L1Q8IWN7 2480 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-209ENST00000553659 SLC38A9Q8NBW4 561 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 FBXO27Q8NI29 283 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 MCOLN3Q8TDD5 553 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 ATL1Q8WXF7 558 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 ROPN1LQ96C74 230 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 C12orf66Q96MD2 445 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 NTMT1Q9BV86 223 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 NOL11Q9H8H0 719 aaKnown RBP15.3■□□□□ 0.04
ACTN1-209ENST00000553659 PLEKHB1Q9UF11 243 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-209ENST00000553659 POLG2Q9UHN1 485 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 ACSL5Q9ULC5 683 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 G3BP2Q9UN86 482 aaKnown RBP15.3■□□□□ 0.04
ACTN1-209ENST00000553659 PCDHGB7Q9Y5F8 929 aa15.3■□□□□ 0.04
ACTN1-209ENST00000553659 PIKFYVEQ9Y2I7 2098 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 KLHL33A6NCF5 533 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 OR6C74A6NCV1 312 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 AIM2O14862 343 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 CEACAM4O75871 244 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 SORBS2O94875 1100 aaKnown RBP15.29■□□□□ 0.04
ACTN1-209ENST00000553659 PSMG1O95456 288 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 EPB42P16452 691 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 HMOX2P30519 316 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 GCKP35557 465 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 AP2B1P63010 937 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 ERVK-8P63133 956 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 MAD2L1Q13257 205 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-209ENST00000553659 BCL7AQ4VC05 210 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 SYTL3Q4VX76 610 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 AGKQ53H12 422 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 PRMT9Q6P2P2 845 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 RIPOR1Q6ZS17 1223 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 MILR1Q7Z6M3 343 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 DSELQ8IZU8 1212 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 OR2L2Q8NH16 312 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 METTL6Q8TCB7 284 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 ADAMTS17Q8TE56 1095 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 ASB11Q8WXH4 323 aa15.29■□□□□ 0.04
ACTN1-209ENST00000553659 ELMO1Q92556 727 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms