RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 PRKCQQ04759 706 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 RBBP4Q09028 425 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 EPS8Q12929 822 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 DDX39BQ13838 428 aaKnown RBP7□□□□□ -1.29
ATXN3-221ENST00000553498 LRRC32Q14392 662 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 HEPACAMQ14CZ8 416 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 ADRM1Q16186 407 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 SFT2D3Q587I9 215 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 DEPDC1Q5TB30 811 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 KHDRBS2Q5VWX1 349 aaKnown RBP7□□□□□ -1.29
ATXN3-221ENST00000553498 CPZQ66K79 652 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 ZBTB49Q6ZSB9 765 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 COMMD6Q7Z4G1 85 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 SLC9B2Q86UD5 537 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 IFNEQ86WN2 208 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 DCP2Q8IU60 420 aaKnown RBP7□□□□□ -1.29
ATXN3-221ENST00000553498 MSRB3Q8IXL7 192 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 DTWD1Q8N5C7 304 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 SRFBP1Q8NEF9 429 aaKnown RBP7□□□□□ -1.29
ATXN3-221ENST00000553498 ST13P5Q8NFI4 369 aaPredicted RBP7□□□□□ -1.29
ATXN3-221ENST00000553498 LRTOMTQ8WZ04 291 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 FAM3CQ92520 227 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 TBC1D20Q96BZ9 403 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 BIRC7Q96CA5 298 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 PPCDCQ96CD2 204 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 MS4A8Q9BY19 250 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 REXO4Q9GZR2 422 aaKnown RBP7□□□□□ -1.29
ATXN3-221ENST00000553498 PCED1AQ9H1Q7 454 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 RPF2Q9H7B2 306 aaKnown RBP7□□□□□ -1.29
ATXN3-221ENST00000553498 CD320Q9NPF0 282 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 DCAF13Q9NV06 445 aaKnown RBP7□□□□□ -1.29
ATXN3-221ENST00000553498 TMEM184CQ9NVA4 438 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 SLC25A37Q9NYZ2 338 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 USP36Q9P275 1121 aaKnown RBP7□□□□□ -1.29
ATXN3-221ENST00000553498 ANKMY1Q9P2S6 941 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 TAC3Q9UHF0 121 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 ZNF639Q9UID6 485 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 RPS6KA6Q9UK32 745 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 VPS4AQ9UN37 437 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 SNX7Q9UNH6 387 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 ICKQ9UPZ9 632 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 AURKCQ9UQB9 309 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 TDRKHQ9Y2W6 561 aaKnown RBP7□□□□□ -1.29
ATXN3-221ENST00000553498 NEUROG3Q9Y4Z2 214 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 DGKBQ9Y6T7 804 aa7□□□□□ -1.29
ATXN3-221ENST00000553498 KIAA0100Q14667 2235 aaKnown RBP7□□□□□ -1.29
ATXN3-221ENST00000553498 CHD7Q9P2D1 2997 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 A0A1W2PPV9 198 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 ARHGAP10A1A4S6 786 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 OR5K4A6NMS3 321 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 GABRR3A8MPY1 467 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 PDZK1P1A8MUH7 402 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 CLIC1O00299 241 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 CXCR6O00574 342 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 CLOCKO15516 846 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 MBTPS2O43462 519 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 DPM1O60762 260 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 RASAL1O95294 804 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 TNFAIP8O95379 198 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 ETHE1O95571 254 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 KRT75O95678 551 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 HPRP00739 348 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 LYNP07948 512 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 FURINP09958 794 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 DRD2P14416 443 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 CMPK1P30085 196 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 GZMMP51124 257 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 TPMTP51580 245 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 CHN2P52757 468 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 ATXN3P54252 364 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-221ENST00000553498 WNT3P56703 355 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 OR4D2P58180 307 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 PHC1P78364 1004 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 TXNL4AP83876 142 aaKnown RBP6.99□□□□□ -1.29
ATXN3-221ENST00000553498 TGM3Q08188 693 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 FADDQ13158 208 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 TDGQ13569 410 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 MLC1Q15049 377 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 PDK3Q15120 406 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 RBBP5Q15291 538 aaKnown RBP6.99□□□□□ -1.29
ATXN3-221ENST00000553498 RPE65Q16518 533 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 LRRC36Q1X8D7 754 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 SLC44A4Q53GD3 710 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 FAM219BQ5XKK7 198 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 OR4F3Q6IEY1 312 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 FAM71E1Q6IPT2 247 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 TRIM40Q6P9F5 258 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 KIAA1324Q6UXG2 1013 aaKnown RBP6.99□□□□□ -1.29
ATXN3-221ENST00000553498 ZNF852Q6ZMS4 543 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 ARMCX6Q7L4S7 300 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 SYT13Q7L8C5 426 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 SPRED1Q7Z699 444 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 NUDT13Q86X67 352 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 ADHFE1Q8IWW8 467 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 RBM12BQ8IXT5 1001 aaKnown RBP6.99□□□□□ -1.29
ATXN3-221ENST00000553498 ST13P4Q8IZP2 240 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-221ENST00000553498 SVOPLQ8N434 492 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 AVL9Q8NBF6 648 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 OR10A6Q8NH74 314 aa6.99□□□□□ -1.29
ATXN3-221ENST00000553498 CLHC1Q8NHS4 586 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms