RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 EEF1AKMT1Q8WVE0 214 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 UTP23Q9BRU9 249 aaKnown RBP11.15□□□□□ -0.62
CKAP4-202ENST00000552828 MCMBPQ9BTE3 642 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 PCBD2Q9H0N5 130 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 CDC42EP4Q9H3Q1 356 aaKnown RBP11.15□□□□□ -0.62
CKAP4-202ENST00000552828 SH3BGRL2Q9UJC5 107 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 TINAGQ9UJW2 476 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 MEMO1Q9Y316 297 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 OR2W5A6NFC9 320 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 C19orf84I3L1E1 186 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 SGK494L7N484 410 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 MAN1A2O60476 641 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 NEURL1O76050 574 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 CLDN14O95500 239 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 ACSL3O95573 720 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 C8GP07360 202 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 SNRPB2P08579 225 aaKnown RBP11.14□□□□□ -0.63
CKAP4-202ENST00000552828 ESRRAP11474 423 aaPredicted RBP11.14□□□□□ -0.63
CKAP4-202ENST00000552828 CD46P15529 392 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 EEF1DP29692 281 aaKnown RBP11.14□□□□□ -0.63
CKAP4-202ENST00000552828 SSTR2P30874 369 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 TAS2R39P59534 338 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 CSNK1G2P78368 415 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 POU4F1Q01851 419 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 RHAGQ02094 409 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 CDSNQ15517 529 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 THEMIS2Q5TEJ8 643 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 FCRLBQ6BAA4 426 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 SPINK14Q6IE38 97 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 PIWIL4Q7Z3Z4 852 aaKnown RBP11.14□□□□□ -0.63
CKAP4-202ENST00000552828 PDSS2Q86YH6 399 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 CHERPQ8IWX8 916 aaKnown RBP11.14□□□□□ -0.63
CKAP4-202ENST00000552828 EIF1ADQ8N9N8 165 aaKnown RBP11.14□□□□□ -0.63
CKAP4-202ENST00000552828 CAMKVQ8NCB2 501 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 MTFMTQ96DP5 389 aaKnown RBP11.14□□□□□ -0.63
CKAP4-202ENST00000552828 LINGO1Q96FE5 620 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 TSPAN17Q96FV3 270 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 MAGED4Q96JG8 741 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 FRMD6Q96NE9 622 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 OR1F2PQ96R84 312 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 RBBP8Q99708 897 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 OLFM1Q99784 485 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 SPOCK3Q9BQ16 436 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 MACROD1Q9BQ69 325 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 HES7Q9BYE0 225 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 KCNK13Q9HB14 408 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 CCDC177Q9NQR7 707 aaPredicted RBP11.14□□□□□ -0.63
CKAP4-202ENST00000552828 LANCL2Q9NS86 450 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 HCN3Q9P1Z3 774 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 MTO1Q9Y2Z2 717 aaKnown RBP11.14□□□□□ -0.63
CKAP4-202ENST00000552828 SLC22A7Q9Y694 548 aa11.14□□□□□ -0.63
CKAP4-202ENST00000552828 MAGEB17A8MXT2 336 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 SLC16A5O15375 505 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 ASNA1O43681 348 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 SLU7O95391 586 aaKnown RBP11.13□□□□□ -0.63
CKAP4-202ENST00000552828 SYF2O95926 243 aaKnown RBP11.13□□□□□ -0.63
CKAP4-202ENST00000552828 STATHP02808 62 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 SP1P08047 785 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 IL1RNP18510 177 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 CAPN3P20807 821 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 KIR3DL1P43629 444 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 ALDH6A1Q02252 535 aaKnown RBP11.13□□□□□ -0.63
CKAP4-202ENST00000552828 USP10Q14694 798 aaKnown RBP11.13□□□□□ -0.63
CKAP4-202ENST00000552828 TESK1Q15569 626 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 NSDHLQ15738 373 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 SFT2D3Q587I9 215 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 MFSD4BQ5TF39 518 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 UBE2R2Q712K3 238 aaPredicted RBP11.13□□□□□ -0.63
CKAP4-202ENST00000552828 TRMT10CQ7L0Y3 403 aaKnown RBP11.13□□□□□ -0.63
CKAP4-202ENST00000552828 SPNS2Q8IVW8 549 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 AFAP1L2Q8N4X5 818 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 NKAPQ8N5F7 415 aaKnown RBP11.13□□□□□ -0.63
CKAP4-202ENST00000552828 SLC5A8Q8N695 610 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 HORMAD2Q8N7B1 307 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 TMEM178AQ8NBL3 297 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 KCT2Q8NC54 265 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 PHF10Q8WUB8 498 aaKnown RBP11.13□□□□□ -0.63
CKAP4-202ENST00000552828 C14orf79Q96F83 325 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 PDLIM5Q96HC4 596 aaKnown RBP11.13□□□□□ -0.63
CKAP4-202ENST00000552828 CCDC138Q96M89 665 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 TREX2Q9BQ50 279 aaPredicted RBP11.13□□□□□ -0.63
CKAP4-202ENST00000552828 SARGQ9BW04 601 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 FUT8Q9BYC5 575 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 ACSS3Q9H6R3 686 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 TRIM45Q9H8W5 580 aaPredicted RBP11.13□□□□□ -0.63
CKAP4-202ENST00000552828 POPDC3Q9HBV1 291 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 ANKHQ9HCJ1 492 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 GPAMQ9HCL2 828 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 KLHL1Q9NR64 748 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 ABCF3Q9NUQ8 709 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 ANKRD10Q9NXR5 420 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 HEATR5BQ9P2D3 2071 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 PCNX1Q96RV3 2341 aa11.13□□□□□ -0.63
CKAP4-202ENST00000552828 NCOA6Q14686 2063 aaPredicted RBP11.12□□□□□ -0.63
CKAP4-202ENST00000552828 A0A087WUV0 522 aaPredicted RBP11.12□□□□□ -0.63
CKAP4-202ENST00000552828 PABPN1LA6NDY0 278 aaKnown RBP11.12□□□□□ -0.63
CKAP4-202ENST00000552828 GABRR3A8MPY1 467 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 NPIPA5E9PKD4 350 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 FAM227AF5H4B4 570 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 ADAM10O14672 748 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms