RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 DDX39BQ13838 428 aaKnown RBP17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 E2F2Q14209 437 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 FAAH2Q6GMR7 532 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 LAPTM4BQ86VI4 370 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 LAS2Q8IYD9 372 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 OR5T3Q8NGG3 340 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 OR2W6PQ8NHA6 318 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 OR1F2PQ96R84 312 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 CENPKQ9BS16 269 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 RBCK1Q9BYM8 510 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 KLHL31Q9H511 634 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 NOL11Q9H8H0 719 aaKnown RBP17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 CLK4Q9HAZ1 481 aaKnown RBP17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 ATP13A2Q9NQ11 1180 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 ADGRE2Q9UHX3 823 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 PCTPQ9UKL6 214 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 ZNF490Q9ULM2 529 aaPredicted RBP17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 PCDHGA11Q9Y5H2 935 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 A0A0G2JN53 185 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 A6NL46 340 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 CHST10O43529 356 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 B3GALT2O43825 422 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 KLHL41O60662 606 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 ALOX12BO75342 701 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 JRKO75564 520 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 B3GALT4O96024 378 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 CYC1P08574 325 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 RPS17P08708 135 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 JAK1P23458 1154 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 ATP5F1P24539 256 aaPredicted RBP17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 HNRNPH1P31943 449 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 CCT5P48643 541 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 PGDP52209 483 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 PLA2G16P53816 162 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 BTN3A2P78410 334 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 AIMP2Q13155 320 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 ADNP2Q6IQ32 1131 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 KIRREL2Q6UWL6 708 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 VN1R5Q7Z5H4 357 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 SLC22A9Q8IVM8 553 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 SRFBP1Q8NEF9 429 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 OR2L5Q8NG80 312 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 OR7G3Q8NG95 312 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 TBC1D20Q96BZ9 403 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 MS4A6EQ96DS6 147 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 ZNF71Q9NQZ8 489 aaPredicted RBP17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 C19orf25Q9UFG5 118 aaPredicted RBP17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 TP53TG5Q9Y2B4 290 aa17.46■□□□□ 0.39
PRPF40B-216ENST00000552301 COPEO14579 308 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 CDC123O75794 336 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 CLDN9O95484 217 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 FHP07954 510 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 C8orf89P0DMQ9 161 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 RNH1P13489 461 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 ITGA3P26006 1051 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 HERVK_113P63132 956 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 EEF1A2Q05639 463 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 C19orf57Q0VDD7 668 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 CPSF6Q16630 551 aaKnown RBP eCLIP17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 TCTN3Q6NUS6 607 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 CHSY3Q70JA7 882 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 CYP4X1Q8N118 509 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 MREGQ8N565 214 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 CCDC63Q8NA47 563 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 OR11G2Q8NGC1 345 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 ZNF473Q8WTR7 871 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 C8orf44Q96CB5 159 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 MAGEB10Q96LZ2 347 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 ERVK-6Q9BXR3 956 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 MS4A8Q9BY19 250 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 ROPN1BQ9BZX4 212 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 ROGDIQ9GZN7 287 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 VN1R1Q9GZP7 353 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 IQCGQ9H095 443 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 ROPN1Q9HAT0 212 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 SEMA4BQ9NPR2 832 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 GPR83Q9NYM4 423 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 RAB21Q9UL25 225 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 PCDHGA9Q9Y5G4 932 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 HEMK1Q9Y5R4 338 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 NUP210LQ5VU65 1888 aa17.45■□□□□ 0.38
PRPF40B-216ENST00000552301 NSG1A0A0A6YYJ2 146 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 FOXO6A8MYZ6 492 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 OTCP00480 354 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 HPP00738 406 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 ALPPP05187 535 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 SBK3P0C264 359 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 SMIM10L1P0DMW3 83 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 MYL2P10916 166 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 PIK3CBP42338 1070 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 RAP1GDS1P52306 607 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 MTTPP55157 894 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 RCN2Q14257 317 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 ADPRMQ3LIE5 342 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 TMEM35AQ53FP2 167 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 TTC19Q6DKK2 380 aaPredicted RBP17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 C4orf33Q8N1A6 199 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 GALNT16Q8N428 558 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 L3MBTL4Q8NA19 623 aa17.44■□□□□ 0.38
PRPF40B-216ENST00000552301 HUS1BQ8NHY5 278 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms