RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 RB1P06400 928 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 FAM163BP0C2L3 166 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 BCKDHAP12694 445 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 EPCAMP16422 314 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 ACVR2AP27037 513 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 PPIGQ13427 754 aaKnown RBP eCLIP15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 EFR3AQ14156 821 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 PROX2Q3B8N5 592 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 MBOAT1Q6ZNC8 495 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 DCP2Q8IU60 420 aaKnown RBP15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 DTWD1Q8N5C7 304 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 ZNF563Q8TA94 476 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 ARMC5Q96C12 935 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 RNF121Q9H920 327 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 CFAP97Q9P2B7 532 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 FZD9O00144 591 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 NT5EP21589 574 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 FGFBP1Q14512 234 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 SMYD5Q6GMV2 418 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 ANKRD54Q6NXT1 300 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 DUS1LQ6P1R4 473 aaKnown RBP15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 TMEM125Q96AQ2 219 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 FEVQ99581 238 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 VRTNQ9H8Y1 702 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 MRPS33Q9Y291 106 aaKnown RBP15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 PCDHGA4Q9Y5G9 962 aa15.28■□□□□ 0.04
RBFOX1-212ENST00000550418 SLC35F4A4IF30 521 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 MRPS14O60783 128 aaKnown RBP15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 UQCRC1P31930 480 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 CBX5P45973 191 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 CREMQ03060 361 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 EXOC3L2Q2M3D2 409 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 EIPR1Q53HC9 387 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 FAM76BQ5HYJ3 339 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 REEP3Q6NUK4 255 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 LRRN1Q6UXK5 716 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 TOR1AIP2Q8NFQ8 470 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 RHOXF1Q8NHV9 184 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 ACDQ96AP0 544 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 STRA6Q9BX79 667 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 PADI3Q9ULW8 664 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 CDH10Q9Y6N8 788 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 RLN2P04090 185 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 MSL3P1P0C860 447 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 GABRR2P28476 465 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 RAB6CQ53S08 254 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 ZNF676Q8N7Q3 588 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 FATE1Q969F0 183 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 NKD1Q969G9 470 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 FUBP3Q96I24 572 aaKnown RBP eCLIP15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 SPATA9Q9BWV2 254 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 C20orf27Q9GZN8 174 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 RAB6CQ9H0N0 254 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 SMOC2Q9H3U7 446 aa15.27■□□□□ 0.04
RBFOX1-212ENST00000550418 AP1G1O43747 822 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 TLL1O43897 1013 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 KLK1P06870 262 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 ALPIP09923 528 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 PCSK6P29122 969 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 CRISP1P54107 249 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 SEMG2Q02383 582 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 SPCS2Q15005 226 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 CHRNA6Q15825 494 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 LILRA2Q8N149 483 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 ATP6V1C2Q8NEY4 427 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 THG1LQ9NWX6 298 aaKnown RBP15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 ZFR2Q9UPR6 939 aaKnown RBP15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 NUP188Q5SRE5 1749 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 PRKACAP17612 351 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 CRHBPP24387 322 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 S100A2P29034 98 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 NCBP2P52298 156 aaKnown RBP eCLIP15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 CCL23P55773 120 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 PITX1P78337 314 aaPredicted RBP15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 SERINC3Q13530 473 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 NTRK2Q16620 822 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 ALG11Q2TAA5 492 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 NOXRED1Q6NXP6 359 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 SETD6Q8TBK2 473 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 L3HYPDHQ96EM0 354 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 MRGPRX2Q96LB1 330 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 YIPF4Q9BSR8 244 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 ACTR6Q9GZN1 396 aa15.27■□□□□ 0.03
RBFOX1-212ENST00000550418 A8MU76 341 aa15.26■□□□□ 0.03
RBFOX1-212ENST00000550418 DISC1C4P0D8 188 aa15.26■□□□□ 0.03
RBFOX1-212ENST00000550418 PRMT3O60678 531 aa15.26■□□□□ 0.03
RBFOX1-212ENST00000550418 SCGNO76038 276 aa15.26■□□□□ 0.03
RBFOX1-212ENST00000550418 CBSLP0DN79 551 aa15.26■□□□□ 0.03
RBFOX1-212ENST00000550418 CBSP35520 551 aa15.26■□□□□ 0.03
RBFOX1-212ENST00000550418 ST3GAL3Q11203 375 aa15.26■□□□□ 0.03
RBFOX1-212ENST00000550418 SNAP47Q5SQN1 464 aa15.26■□□□□ 0.03
RBFOX1-212ENST00000550418 KANK2Q63ZY3 851 aa15.26■□□□□ 0.03
RBFOX1-212ENST00000550418 PEX13Q92968 403 aa15.26■□□□□ 0.03
RBFOX1-212ENST00000550418 S100A16Q96FQ6 103 aaKnown RBP15.26■□□□□ 0.03
RBFOX1-212ENST00000550418 TSNAXQ99598 290 aaKnown RBP15.26■□□□□ 0.03
RBFOX1-212ENST00000550418 SMOQ99835 787 aa15.26■□□□□ 0.03
RBFOX1-212ENST00000550418 CDADC1Q9BWV3 514 aa15.26■□□□□ 0.03
RBFOX1-212ENST00000550418 EXO5Q9H790 373 aa15.26■□□□□ 0.03
RBFOX1-212ENST00000550418 MEMO1Q9Y316 297 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 329.4 ms