RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 FAM111AQ96PZ2 611 aa21.34■■□□□ 1.01
BRF1-216ENST00000550208 OXSMQ9NWU1 459 aa21.34■■□□□ 1.01
BRF1-216ENST00000550208 SENP1Q9P0U3 644 aa21.34■■□□□ 1.01
BRF1-216ENST00000550208 ZNF225Q9UK10 706 aa21.34■■□□□ 1.01
BRF1-216ENST00000550208 MAP4K5Q9Y4K4 846 aa21.34■■□□□ 1.01
BRF1-216ENST00000550208 TYROBPO43914 113 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 OTX2P32243 289 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 NEK2P51955 445 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 NAGLUP54802 743 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 DNAJB13P59910 316 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 OLR1P78380 273 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 BTN3A2P78410 334 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 ADPRMQ3LIE5 342 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 FAM219BQ5XKK7 198 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 C10orf107Q8IVU9 208 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 OR51Q1Q8NH59 317 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 GAL3ST3Q96A11 431 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 PGM2Q96G03 612 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 MTERF1Q99551 399 aaKnown RBP21.33■■□□□ 1.01
BRF1-216ENST00000550208 MS4A8Q9BY19 250 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 REXO4Q9GZR2 422 aaKnown RBP21.33■■□□□ 1.01
BRF1-216ENST00000550208 GSTO2Q9H4Y5 243 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 MKKSQ9NPJ1 570 aaPredicted RBP21.33■■□□□ 1.01
BRF1-216ENST00000550208 ADGRE2Q9UHX3 823 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 TSC22D4Q9Y3Q8 395 aa21.33■■□□□ 1.01
BRF1-216ENST00000550208 ERI3O43414 337 aaKnown RBP21.32■■□□□ 1
BRF1-216ENST00000550208 CHST10O43529 356 aa21.32■■□□□ 1
BRF1-216ENST00000550208 OR4F21O95013 312 aa21.32■■□□□ 1
BRF1-216ENST00000550208 OTCP00480 354 aa21.32■■□□□ 1
BRF1-216ENST00000550208 SERPINB1P30740 379 aa21.32■■□□□ 1
BRF1-216ENST00000550208 PIK3CBP42338 1070 aa21.32■■□□□ 1
BRF1-216ENST00000550208 PLA2G16P53816 162 aa21.32■■□□□ 1
BRF1-216ENST00000550208 KLC1Q07866 573 aa21.32■■□□□ 1
BRF1-216ENST00000550208 TBR1Q16650 682 aa21.32■■□□□ 1
BRF1-216ENST00000550208 LETMD1Q6P1Q0 360 aa21.32■■□□□ 1
BRF1-216ENST00000550208 ZC3H7AQ8IWR0 971 aaKnown RBP21.32■■□□□ 1
BRF1-216ENST00000550208 OR2L5Q8NG80 312 aa21.32■■□□□ 1
BRF1-216ENST00000550208 WDR20Q8TBZ3 569 aa21.32■■□□□ 1
BRF1-216ENST00000550208 TGIF2Q9GZN2 237 aa21.32■■□□□ 1
BRF1-216ENST00000550208 OR51B5Q9H339 312 aa21.32■■□□□ 1
BRF1-216ENST00000550208 MID2Q9UJV3 735 aa21.32■■□□□ 1
BRF1-216ENST00000550208 NXT1Q9UKK6 140 aaKnown RBP21.32■■□□□ 1
BRF1-216ENST00000550208 JRKO75564 520 aa21.31■■□□□ 1
BRF1-216ENST00000550208 BMP10O95393 424 aa21.31■■□□□ 1
BRF1-216ENST00000550208 ALDH3A1P30838 453 aa21.31■■□□□ 1
BRF1-216ENST00000550208 RPS13P62277 151 aaKnown RBP21.31■■□□□ 1
BRF1-216ENST00000550208 PCLAFQ15004 111 aa21.31■■□□□ 1
BRF1-216ENST00000550208 DEPDC1Q5TB30 811 aa21.31■■□□□ 1
BRF1-216ENST00000550208 TTC19Q6DKK2 380 aaPredicted RBP21.31■■□□□ 1
BRF1-216ENST00000550208 ABHD17CQ6PCB6 329 aa21.31■■□□□ 1
BRF1-216ENST00000550208 UBE3DQ7Z6J8 389 aa21.31■■□□□ 1
BRF1-216ENST00000550208 REPS1Q96D71 796 aa21.31■■□□□ 1
BRF1-216ENST00000550208 CMTM7Q96FZ5 175 aa21.31■■□□□ 1
BRF1-216ENST00000550208 FAR2Q96K12 515 aa21.31■■□□□ 1
BRF1-216ENST00000550208 CATSPER2Q96P56 530 aa21.31■■□□□ 1
BRF1-216ENST00000550208 QRFPRQ96P65 431 aa21.31■■□□□ 1
BRF1-216ENST00000550208 DMRT3Q9NQL9 472 aa21.31■■□□□ 1
BRF1-216ENST00000550208 PRDM7Q9NQW5 492 aa21.31■■□□□ 1
BRF1-216ENST00000550208 MAGEB17A8MXT2 336 aa21.3■■□□□ 1
BRF1-216ENST00000550208 SAP18O00422 153 aaKnown RBP21.3■■□□□ 1
BRF1-216ENST00000550208 MYZAPP0CAP1 466 aa21.3■■□□□ 1
BRF1-216ENST00000550208 H2AFXP16104 143 aaPredicted RBP21.3■■□□□ 1
BRF1-216ENST00000550208 CCR10P46092 362 aa21.3■■□□□ 1
BRF1-216ENST00000550208 XCR1P46094 333 aa21.3■■□□□ 1
BRF1-216ENST00000550208 RUNX2Q13950 521 aa21.3■■□□□ 1
BRF1-216ENST00000550208 GGTA1PQ4G0N0 100 aa21.3■■□□□ 1
BRF1-216ENST00000550208 SGO1Q5FBB7 561 aa21.3■■□□□ 1
BRF1-216ENST00000550208 LIPMQ5VYY2 423 aa21.3■■□□□ 1
BRF1-216ENST00000550208 NIPAL1Q6NVV3 410 aa21.3■■□□□ 1
BRF1-216ENST00000550208 CHSY3Q70JA7 882 aa21.3■■□□□ 1
BRF1-216ENST00000550208 PPP1R32Q7Z5V6 425 aa21.3■■□□□ 1
BRF1-216ENST00000550208 EXTL1Q92935 676 aa21.3■■□□□ 1
BRF1-216ENST00000550208 PEX11GQ96HA9 241 aa21.3■■□□□ 1
BRF1-216ENST00000550208 ZNF382Q96SR6 550 aa21.3■■□□□ 1
BRF1-216ENST00000550208 POLHQ9Y253 713 aa21.3■■□□□ 1
BRF1-216ENST00000550208 CFAP47Q6ZTR5 3102 aa21.3■■□□□ 1
BRF1-216ENST00000550208 OR2W5A6NFC9 320 aa21.29■■□□□ 1
BRF1-216ENST00000550208 TRIM13O60858 407 aa21.29■■□□□ 1
BRF1-216ENST00000550208 MLYCDO95822 493 aa21.29■■□□□ 1
BRF1-216ENST00000550208 HPDP32754 393 aaPredicted RBP21.29■■□□□ 1
BRF1-216ENST00000550208 EMP2P54851 167 aa21.29■■□□□ 1
BRF1-216ENST00000550208 SKP1P63208 163 aa21.29■■□□□ 1
BRF1-216ENST00000550208 RHDQ02161 417 aa21.29■■□□□ 1
BRF1-216ENST00000550208 LCP2Q13094 533 aa21.29■■□□□ 1
BRF1-216ENST00000550208 LINC00303Q3SY05 128 aa21.29■■□□□ 1
BRF1-216ENST00000550208 TMEM35AQ53FP2 167 aa21.29■■□□□ 1
BRF1-216ENST00000550208 CFAP157Q5JU67 520 aa21.29■■□□□ 1
BRF1-216ENST00000550208 KHDRBS2Q5VWX1 349 aaKnown RBP21.29■■□□□ 1
BRF1-216ENST00000550208 TRIM40Q6P9F5 258 aa21.29■■□□□ 1
BRF1-216ENST00000550208 GPRIN3Q6ZVF9 776 aa21.29■■□□□ 1
BRF1-216ENST00000550208 RAB43Q86YS6 212 aa21.29■■□□□ 1
BRF1-216ENST00000550208 CDYL2Q8N8U2 506 aa21.29■■□□□ 1
BRF1-216ENST00000550208 THAP4Q8WY91 577 aa21.29■■□□□ 1
BRF1-216ENST00000550208 TTC9Q92623 222 aa21.29■■□□□ 1
BRF1-216ENST00000550208 MAGEB10Q96LZ2 347 aaPredicted RBP21.29■■□□□ 1
BRF1-216ENST00000550208 CRB3Q9BUF7 120 aa21.29■■□□□ 1
BRF1-216ENST00000550208 MECRQ9BV79 373 aa21.29■■□□□ 1
BRF1-216ENST00000550208 GATA5Q9BWX5 397 aaPredicted RBP21.29■■□□□ 1
BRF1-216ENST00000550208 TMBIM4Q9HC24 238 aa21.29■■□□□ 1
BRF1-216ENST00000550208 SSU72Q9NP77 194 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms