RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 OR56A3Q8NH54 315 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 FAM57AQ8TBR7 257 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 LINGO1Q96FE5 620 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 SIGLEC10Q96LC7 697 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 DEFB126Q9BYW3 111 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 PRDM9Q9NQV7 894 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 TCRBV16S1A1N1A0A5B0 115 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 FOXO6A8MYZ6 492 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 ADAM10O14672 748 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 TTC4O95801 387 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 TPOP07202 933 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 ENO2P09104 434 aaPredicted RBP12.7□□□□□ -0.38
TROAP-211ENST00000549891 PGAM1P18669 254 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 PTGER1P34995 402 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 MEOX1P50221 254 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 CLCN2P51788 898 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 OLR1P78380 273 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 PDAP1Q13442 181 aaKnown RBP12.7□□□□□ -0.38
TROAP-211ENST00000549891 TESK1Q15569 626 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 RNFT1Q5M7Z0 435 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 TTC27Q6P3X3 843 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 KIAA0408Q6ZU52 694 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 SPNS2Q8IVW8 549 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 CHERPQ8IWX8 916 aaKnown RBP12.7□□□□□ -0.38
TROAP-211ENST00000549891 TRPV3Q8NET8 790 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 ASB5Q8WWX0 329 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 PYCR2Q96C36 320 aa12.7□□□□□ -0.38
TROAP-211ENST00000549891 NAP1L3Q99457 506 aaPredicted RBP12.7□□□□□ -0.38
TROAP-211ENST00000549891 INTS1Q8N201 2190 aaKnown RBP12.7□□□□□ -0.38
TROAP-211ENST00000549891 A0A1B0GTH9 108 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 USP27XA6NNY8 438 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 CDC40O60508 579 aaKnown RBP eCLIP12.69□□□□□ -0.38
TROAP-211ENST00000549891 MAOAP21397 527 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 SCTRP47872 440 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 CDKN2DP55273 166 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 KRTAP10-9P60411 292 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 BTG2P78543 158 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 TIAL1Q01085 375 aaKnown RBP eCLIP12.69□□□□□ -0.38
TROAP-211ENST00000549891 CRYMQ14894 314 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 TERF2Q15554 542 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 CATSPEREQ5SY80 951 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 ARHGAP11AQ6P4F7 1023 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 CCDC137Q6PK04 289 aaKnown RBP12.69□□□□□ -0.38
TROAP-211ENST00000549891 PAOXQ6QHF9 649 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 CD163Q86VB7 1156 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 ZNF227Q86WZ6 799 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 SULF2Q8IWU5 870 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 PPIL6Q8IXY8 311 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 CYP4Z2PQ8N1L4 340 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 TMEM156Q8N614 296 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 NAT8LQ8N9F0 302 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 NFAM1Q8NET5 270 aaPredicted RBP12.69□□□□□ -0.38
TROAP-211ENST00000549891 C16orf52Q8NHV5 167 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 UTP15Q8TED0 518 aaKnown RBP12.69□□□□□ -0.38
TROAP-211ENST00000549891 GRK7Q8WTQ7 553 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 SLC5A11Q8WWX8 675 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 FBXL8Q96CD0 374 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 OR4K3Q96R72 315 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 TREX2Q9BQ50 279 aaPredicted RBP12.69□□□□□ -0.38
TROAP-211ENST00000549891 AIF1LQ9BQI0 150 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 NAT9Q9BTE0 207 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 TP63Q9H3D4 680 aaPredicted RBP12.69□□□□□ -0.38
TROAP-211ENST00000549891 DYRK1BQ9Y463 629 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 MMACHCQ9Y4U1 282 aa12.69□□□□□ -0.38
TROAP-211ENST00000549891 DNAJC13O75165 2243 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 IGKV3D-11A0A0A0MRZ8 115 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 ZNHIT1O43257 154 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 PEX1O43933 1283 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 HS6ST1O60243 411 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 DNAJB6O75190 326 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 GUCA1CO95843 209 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 CHRNB4P30926 498 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 SPANXN3Q5MJ09 141 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 RBM20Q5T481 1227 aaKnown RBP12.68□□□□□ -0.38
TROAP-211ENST00000549891 FGD2Q7Z6J4 655 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 GALNT7Q86SF2 657 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 CNTN4Q8IWV2 1026 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 AGGF1Q8N302 714 aaeCLIP12.68□□□□□ -0.38
TROAP-211ENST00000549891 RASGEF1CQ8N431 466 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 B3GNT7Q8NFL0 401 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 RND1Q92730 232 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 NEIL2Q969S2 332 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 PBKQ96KB5 322 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 CCDC77Q9BR77 488 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 SLC6A16Q9GZN6 736 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 PELI2Q9HAT8 420 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 SLC24A3Q9HC58 644 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 TIMMDC1Q9NPL8 285 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 CORO1CQ9ULV4 474 aaPredicted RBP12.68□□□□□ -0.38
TROAP-211ENST00000549891 ZNF407Q9C0G0 2248 aa12.68□□□□□ -0.38
TROAP-211ENST00000549891 TRBV11-1A0A0K0K1C0 115 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 SYNDIG1LA6NDD5 238 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 A8MUA0 341 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 ITGA10O75578 1167 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 MYO1DO94832 1006 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 B3GALT4O96024 378 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 AHSGP02765 367 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 TUBB4AP04350 444 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 SERPINA6P08185 405 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 CD1EP15812 388 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms