RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 NUAK2Q9H093 628 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 SPATA6Q9NWH7 488 aaPredicted RBP11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 PRAMEF25A6NGN4 478 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 FADS2P1A8MWK0 482 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 TMEM229AB2RXF0 380 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 CTDSP2O14595 271 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 POP4O95707 220 aaKnown RBP11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 CATP04040 527 aaKnown RBP11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 INHAP05111 366 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 MPC1LP0DKB6 136 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 AZGP1P25311 298 aaKnown RBP11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 FADDQ13158 208 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 GCNT6Q5T4J0 391 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 TPGS2Q68CL5 300 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 SLC46A3Q7Z3Q1 461 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 SZRD1Q7Z422 152 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 OR8H2Q8N162 312 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 AQP11Q8NBQ7 271 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 WDR36Q8NI36 951 aaKnown RBP11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 WDR48Q8TAF3 677 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 TBC1D20Q96BZ9 403 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 PSD2Q9BQI7 771 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 CORO1BQ9BR76 489 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 TPK1Q9H3S4 243 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 WDR70Q9NW82 654 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 SH2B3Q9UQQ2 575 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 CKAP5Q14008 2032 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 C1orf226A1L170 272 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 PRMT3O60678 531 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 CKMT1AP12532 417 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 IMPA1P29218 277 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 ASMTP46597 345 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 TBCEQ15813 527 aaPredicted RBP11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 ARSIQ5FYB1 569 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 CDKL4Q5MAI5 379 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 ANXA8L1Q5VT79 327 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 GDPD4Q6W3E5 623 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 PTCHD4Q6ZW05 846 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 CYP4Z2PQ8N1L4 340 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 CELF2-AS1Q8N7Q2 184 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 HHIPQ96QV1 700 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 LYSMD1Q96S90 227 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 WRAP53Q9BUR4 548 aaKnown RBP11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 ITM2BQ9Y287 266 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 KCNE2Q9Y6J6 123 aa11.45□□□□□ -0.58
RAPGEF3-219ENST00000549151 SCN8AQ9UQD0 1980 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 IGLV3-16A0A075B6K0 115 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 PRAMEF33A0A0G2JMD5 474 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 H3BM21 787 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 LEFTY2O00292 366 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 KIAA0513O60268 411 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 PRAMEF10O60809 474 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 COQ9O75208 318 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 MED26O95402 600 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 KLK1P06870 262 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 TIA1P31483 386 aaKnown RBP eCLIP11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 RGS6P49758 472 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 TAS2R50P59544 299 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 TUBA1BP68363 451 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 CDK6Q00534 326 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 SLBPQ14493 270 aaKnown RBP eCLIP11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 SLC5A12Q1EHB4 618 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 SPANXN2Q5MJ10 180 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 TMEM220Q6QAJ8 160 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 CCBE1Q6UXH8 406 aaPredicted RBP11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 TUBA1AQ71U36 451 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 ZNF740Q8NDX6 193 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 FCGR1BQ92637 280 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 PPCDCQ96CD2 204 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 GABARAPL3Q9BY60 117 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 EHD3Q9NZN3 535 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 IFT52Q9Y366 437 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 PNMA8CA0A1B0GUJ8 204 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 TEX28O15482 410 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 ASNA1O43681 348 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 AOC2O75106 756 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 LEFTY1O75610 366 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 GADD45GO95257 159 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 IGFBP1P08833 259 aaPredicted RBP11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 PCGF2P35227 344 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 HNF4AP41235 474 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 CSNK1DP48730 415 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 DAB2P98082 770 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 SP140Q13342 867 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 PTGES3Q15185 160 aaKnown RBP11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 SF3B4Q15427 424 aaKnown RBP eCLIP11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 TEAD4Q15561 434 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 MICAQ29983 383 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 RPS26P11Q5JNZ5 115 aaPredicted RBP11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 C6orf183Q5T699 404 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 LHX8Q68G74 356 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 TNFAIP8L2Q6P589 184 aaPredicted RBP11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 COMMD6Q7Z4G1 85 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 C11orf74Q86VG3 221 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 METTL4Q8N3J2 472 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 RASGEF1AQ8N9B8 481 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 KBTBD8Q8NFY9 601 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 VANGL1Q8TAA9 524 aaPredicted RBP11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 ATL1Q8WXF7 558 aa11.44□□□□□ -0.58
RAPGEF3-219ENST00000549151 VOPP1Q96AW1 172 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms