RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 TRGV8A0A0C4DH27 118 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 NCF1BA6NI72 391 aaPredicted RBP12.51□□□□□ -0.41
CPSF6-204ENST00000547486 GABRR3A8MPY1 467 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 NCF1CA8MVU1 366 aaPredicted RBP12.51□□□□□ -0.41
CPSF6-204ENST00000547486 PRAMEF4O60810 478 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 NEURL1O76050 574 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 WDR47O94967 919 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 SERPINA6P08185 405 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 C1GALT1C1LP0DN25 315 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 NCF1P14598 390 aaPredicted RBP12.51□□□□□ -0.41
CPSF6-204ENST00000547486 JAK1P23458 1154 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 HNMTP50135 292 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 BTN3A2P78410 334 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 RUNX2Q13950 521 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 FBXO48Q5FWF7 155 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 PRAMEF9Q5VWM5 478 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 SP5Q6BEB4 398 aaPredicted RBP12.51□□□□□ -0.41
CPSF6-204ENST00000547486 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.51□□□□□ -0.41
CPSF6-204ENST00000547486 KLHDC8AQ8IYD2 350 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 CYP4X1Q8N118 509 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 CA13Q8N1Q1 262 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 SLC5A8Q8N695 610 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 PYROXD1Q8WU10 500 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 ESAMQ96AP7 390 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 PDLIM2Q96JY6 352 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 DPH5Q9H2P9 285 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 POPDC3Q9HBV1 291 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 RNF14Q9UBS8 474 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 PCDHGB6Q9Y5F9 930 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 CPAMD8Q8IZJ3 1885 aa12.51□□□□□ -0.41
CPSF6-204ENST00000547486 ZGRF1Q86YA3 2104 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 SVILO95425 2214 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 A0A0G2JN53 185 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 TCRBV16S1A1N1A0A5B0 115 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 LRIT2A6NDA9 550 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 A8MUA0 341 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 NDC80O14777 642 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 PHGDHO43175 533 aaKnown RBP12.5□□□□□ -0.41
CPSF6-204ENST00000547486 TBX6O95947 436 aaPredicted RBP12.5□□□□□ -0.41
CPSF6-204ENST00000547486 C1QAP02745 245 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 SP1P08047 785 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 GNAZP19086 355 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 TPP2P29144 1249 aaPredicted RBP12.5□□□□□ -0.41
CPSF6-204ENST00000547486 HNRNPH1P31943 449 aaKnown RBP12.5□□□□□ -0.41
CPSF6-204ENST00000547486 GMPRP36959 345 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 KCNC1P48547 511 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 SKP1P63208 163 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 POU4F1Q01851 419 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 OC90Q02509 493 aaPredicted RBP12.5□□□□□ -0.41
CPSF6-204ENST00000547486 TGFBIQ15582 683 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 OR4D1Q15615 310 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 NIPAL1Q6NVV3 410 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 QSOX2Q6ZRP7 698 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 VN1R5Q7Z5H4 357 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 ADAMTSL2Q86TH1 951 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 RPS19BP1Q86WX3 136 aaKnown RBP12.5□□□□□ -0.41
CPSF6-204ENST00000547486 ZNF227Q86WZ6 799 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 ITLN2Q8WWU7 325 aaPredicted RBP12.5□□□□□ -0.41
CPSF6-204ENST00000547486 MS4A6EQ96DS6 147 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 ERP44Q9BS26 406 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 TMEM79Q9BSE2 394 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 DERL2Q9GZP9 239 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 TSPAN10Q9H1Z9 355 aaPredicted RBP12.5□□□□□ -0.41
CPSF6-204ENST00000547486 CLK4Q9HAZ1 481 aaKnown RBP12.5□□□□□ -0.41
CPSF6-204ENST00000547486 SAYSD1Q9NPB0 183 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 PRDM9Q9NQV7 894 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 NSMCE4AQ9NXX6 385 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 GRHL1Q9NZI5 618 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 ZNF490Q9ULM2 529 aaPredicted RBP12.5□□□□□ -0.41
CPSF6-204ENST00000547486 ITPR2Q14571 2701 aa12.5□□□□□ -0.41
CPSF6-204ENST00000547486 SCN2AQ99250 2005 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 TCRBV9S1A1TA0A576 114 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 ASPDHA6ND91 283 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 URADA6NGE7 173 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 NPIPA5E9PKD4 350 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 TGFBR3LH3BV60 316 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 CCL21O00585 134 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 ZNHIT1O43257 154 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 RAD51CO43502 376 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 H2AFYO75367 372 aaKnown RBP12.49□□□□□ -0.41
CPSF6-204ENST00000547486 CCDC166P0CW27 439 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 RNH1P13489 461 aaKnown RBP12.49□□□□□ -0.41
CPSF6-204ENST00000547486 PRF1P14222 555 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 CD1DP15813 335 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 GRNP28799 593 aaKnown RBP12.49□□□□□ -0.41
CPSF6-204ENST00000547486 EEF1DP29692 281 aaKnown RBP12.49□□□□□ -0.41
CPSF6-204ENST00000547486 GGT5P36269 586 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 CA7P43166 264 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 HNRNPFP52597 415 aaKnown RBP12.49□□□□□ -0.41
CPSF6-204ENST00000547486 MLF1P58340 268 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 TAS2R50P59544 299 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 GPX6P59796 221 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 SLBPQ14493 270 aaKnown RBP eCLIP12.49□□□□□ -0.41
CPSF6-204ENST00000547486 TRADDQ15628 312 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 ADNP2Q6IQ32 1131 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 SLC25A25Q6KCM7 469 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 TMIGD1Q6UXZ0 262 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 C3orf62Q6ZUJ4 267 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 FRA10AC1Q70Z53 315 aa12.49□□□□□ -0.41
CPSF6-204ENST00000547486 GALNTL5Q7Z4T8 443 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms