RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 F5H0A9 414 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-212ENST00000546744 CLDN5O00501 218 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 CDK14O94921 469 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 SLC35E2BP0CK96 405 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 HLA-EP13747 358 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 RHCEP18577 417 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 ADH6P28332 368 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 NR4A2P43354 598 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 UBAP2Q5T6F2 1119 aaKnown RBP12.38□□□□□ -0.43
PTCH1-212ENST00000546744 FAM69AQ5T7M9 428 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 MAP1SQ66K74 1059 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-212ENST00000546744 KIAA1161Q6NSJ0 714 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 TCEANCQ8N8B7 351 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 ARL11Q969Q4 196 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 RIPOR3Q96MK2 946 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 OR2M2Q96R28 347 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 HBEGFQ99075 208 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 PBDC1Q9BVG4 233 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 GLIS2Q9BZE0 524 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-212ENST00000546744 MKKSQ9NPJ1 570 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-212ENST00000546744 ZFP57Q9NU63 452 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 ABCB8Q9NUT2 735 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 FKBPLQ9UIM3 349 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 CNTNAP1P78357 1384 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 TBL1XO60907 577 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 XYLBO75191 536 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 LHCGRP22888 699 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 CDKL1Q00532 357 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 POU4F2Q12837 409 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 SLC25A25Q6KCM7 469 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 ZNF676Q8N7Q3 588 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 GNPDA2Q8TDQ7 276 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 SLC35F5Q8WV83 523 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 RAB11FIP5Q9BXF6 653 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 GPR88Q9GZN0 384 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 ABCG8Q9H221 673 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 ELL3Q9HB65 397 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-212ENST00000546744 ERVK13-1Q9NX77 482 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 OR2AG2A6NM03 316 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 FOXD2O60548 495 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-212ENST00000546744 DCTP40126 519 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 CYCSP99999 105 aaKnown RBP12.38□□□□□ -0.43
PTCH1-212ENST00000546744 RASGEF1BQ0VAM2 473 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 APOFQ13790 326 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 GOLGA7Q7Z5G4 137 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 NUDT13Q86X67 352 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 SLC7A13Q8TCU3 470 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 CXorf40BQ96DE9 158 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 GPER1Q99527 375 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 FBRSL1Q9HCM7 1045 aaKnown RBP12.38□□□□□ -0.43
PTCH1-212ENST00000546744 B3GNT2Q9NY97 397 aa12.38□□□□□ -0.43
PTCH1-212ENST00000546744 PCDH8O95206 1070 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 HOXC8P31273 242 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 CDKN2CP42773 168 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 STXBP1P61764 594 aaKnown RBP12.37□□□□□ -0.43
PTCH1-212ENST00000546744 MPP7Q5T2T1 576 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 TMCO2Q7Z6W1 182 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-212ENST00000546744 PHYKPLQ8IUZ5 450 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 OR7G2Q8NG99 324 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 OR2T35Q8NGX2 323 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 ZFP90Q8TF47 636 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 MUL1Q969V5 352 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 KIAA1143Q96AT1 154 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-212ENST00000546744 TMED9Q9BVK6 235 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 TNKS2Q9H2K2 1166 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 SACM1LQ9NTJ5 587 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 ZCCHC3Q9NUD5 404 aaKnown RBP12.37□□□□□ -0.43
PTCH1-212ENST00000546744 SLC17A6Q9P2U8 582 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 NLKQ9UBE8 527 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 FZD1Q9UP38 647 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 NAV1Q8NEY1 1877 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 GPR25O00155 361 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 GRIN3BO60391 1043 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 TSPAN1O60635 241 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 SCGNO76038 276 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 WDPCPO95876 746 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 MAP3K8P41279 467 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 NKX2-5P52952 324 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-212ENST00000546744 HMGCS1Q01581 520 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 RAPSNQ13702 412 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 ZNF598Q86UK7 904 aaKnown RBP12.37□□□□□ -0.43
PTCH1-212ENST00000546744 OR2L2Q8NH16 312 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 RIT1Q92963 219 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 FKBP10Q96AY3 582 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 MOAP1Q96BY2 351 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 NPY6RQ99463 290 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 GORASP2Q9H8Y8 452 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 PRDM5Q9NQX1 630 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-212ENST00000546744 SMPD4Q9NXE4 827 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 MYH1P12882 1939 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 TEX13CA0A0J9YWL9 993 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 ZNF670-ZNF695F2Z2N8 137 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 ARNTLO00327 626 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 RENP00797 406 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 IL1AP01583 271 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 AKR1A1P14550 325 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 TRIM23P36406 574 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 ZNF280AP59817 542 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-212ENST00000546744 RAET1GQ6H3X3 334 aa12.37□□□□□ -0.43
PTCH1-212ENST00000546744 C16orf59Q7L2K0 433 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms