RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 KCNE2Q9Y6J6 123 aa13.42□□□□□ -0.26
TROAP-203ENST00000546735 NCF1BA6NI72 391 aaPredicted RBP13.41□□□□□ -0.26
TROAP-203ENST00000546735 NCF1CA8MVU1 366 aaPredicted RBP13.41□□□□□ -0.26
TROAP-203ENST00000546735 NPIPA5E9PKD4 350 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 SLC19A2O60779 497 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 NEURL1O76050 574 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 WDR47O94967 919 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 NCF1P14598 390 aaPredicted RBP13.41□□□□□ -0.26
TROAP-203ENST00000546735 CD46P15529 392 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 TPP2P29144 1249 aaPredicted RBP13.41□□□□□ -0.26
TROAP-203ENST00000546735 EEF1DP29692 281 aaKnown RBP13.41□□□□□ -0.26
TROAP-203ENST00000546735 RPL21P46778 160 aaKnown RBP13.41□□□□□ -0.26
TROAP-203ENST00000546735 SKP1P63208 163 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 ALDH6A1Q02252 535 aaKnown RBP13.41□□□□□ -0.26
TROAP-203ENST00000546735 C3AR1Q16581 482 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 FBXO48Q5FWF7 155 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 SLC25A25Q6KCM7 469 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 QSOX2Q6ZRP7 698 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 FRA10AC1Q70Z53 315 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.41□□□□□ -0.26
TROAP-203ENST00000546735 RPS19BP1Q86WX3 136 aaKnown RBP13.41□□□□□ -0.26
TROAP-203ENST00000546735 TICAM1Q8IUC6 712 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.41□□□□□ -0.26
TROAP-203ENST00000546735 ZBED8Q8IZ13 594 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 CA13Q8N1Q1 262 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 TRPV3Q8NET8 790 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 FRMD6Q96NE9 622 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 RUNDC3BQ96NL0 473 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 NAPGQ99747 312 aaPredicted RBP13.41□□□□□ -0.26
TROAP-203ENST00000546735 CAB39LQ9H9S4 337 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 GPAMQ9HCL2 828 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 LRFN1Q9P244 771 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 CTNNAL1Q9UBT7 734 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 TINAGQ9UJW2 476 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 NPIPA1Q9UND3 350 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 MTO1Q9Y2Z2 717 aaKnown RBP13.41□□□□□ -0.26
TROAP-203ENST00000546735 SAR1BQ9Y6B6 198 aa13.41□□□□□ -0.26
TROAP-203ENST00000546735 SCN2AQ99250 2005 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 TCRBV16S1A1N1A0A5B0 115 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 ASPDHA6ND91 283 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 URADA6NGE7 173 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 SAGE2PA6NJ88 616 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 E7ESA3 106 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 PSMD12O00232 456 aaPredicted RBP13.4□□□□□ -0.26
TROAP-203ENST00000546735 FANCGO15287 622 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 HNRNPRO43390 633 aaKnown RBP13.4□□□□□ -0.26
TROAP-203ENST00000546735 SP1P08047 785 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 C1GALT1C1LP0DN25 315 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 RNH1P13489 461 aaKnown RBP13.4□□□□□ -0.26
TROAP-203ENST00000546735 SLC6A12P48065 614 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 BTN3A2P78410 334 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 CDKL1Q00532 357 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 HSF1Q00613 529 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 RBPJQ06330 500 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 SLBPQ14493 270 aaKnown RBP eCLIP13.4□□□□□ -0.26
TROAP-203ENST00000546735 MAPKAPK3Q16644 382 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 NIPAL1Q6NVV3 410 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 ZNF227Q86WZ6 799 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 SLC34A3Q8N130 599 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 TMEM178AQ8NBL3 297 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 NFAM1Q8NET5 270 aaPredicted RBP13.4□□□□□ -0.26
TROAP-203ENST00000546735 CCT6BQ92526 530 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 ESAMQ96AP7 390 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 RHBDF1Q96CC6 855 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 VPS39Q96JC1 886 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 GPR137Q96N19 417 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 DPH5Q9H2P9 285 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 RHOJQ9H4E5 214 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 PRDM9Q9NQV7 894 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 PCDHGB6Q9Y5F9 930 aa13.4□□□□□ -0.26
TROAP-203ENST00000546735 IGKV3D-11A0A0A0MRZ8 115 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 CXorf49A8MYA2 514 aaPredicted RBP13.39□□□□□ -0.27
TROAP-203ENST00000546735 CCDC188H7C350 402 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 TAPBPO15533 448 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 PHGDHO43175 533 aaKnown RBP13.39□□□□□ -0.27
TROAP-203ENST00000546735 SERPINA6P08185 405 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 SSTR1P30872 391 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 HNRNPH1P31943 449 aaKnown RBP13.39□□□□□ -0.27
TROAP-203ENST00000546735 PAFAH1B1P43034 410 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 HNRNPFP52597 415 aaKnown RBP13.39□□□□□ -0.27
TROAP-203ENST00000546735 ADORA2A-AS1P86434 159 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 RUNX2Q13950 521 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 RNFT1Q5M7Z0 435 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 ADNP2Q6IQ32 1131 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 SLCO4C1Q6ZQN7 724 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 NCCRP1Q6ZVX7 275 aaPredicted RBP13.39□□□□□ -0.27
TROAP-203ENST00000546735 ADAMTSL2Q86TH1 951 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 LGI4Q8N135 537 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 TMEM52Q8NDY8 209 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 THAP3Q8WTV1 239 aaPredicted RBP13.39□□□□□ -0.27
TROAP-203ENST00000546735 ANKRD7Q92527 254 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 TMEM79Q9BSE2 394 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 MCMBPQ9BTE3 642 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 PYCARDQ9ULZ3 195 aa13.39□□□□□ -0.27
TROAP-203ENST00000546735 TRBV11-1A0A0K0K1C0 115 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 TGFBR3LH3BV60 316 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 PRAMEF4O60810 478 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 H2AFYO75367 372 aaKnown RBP13.38□□□□□ -0.27
TROAP-203ENST00000546735 SLC25A12O75746 678 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 WISP3O95389 354 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms