RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PI4K2AQ9BTU6 479 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 GPR88Q9GZN0 384 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 DNAI2Q9GZS0 605 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 CHORDC1Q9UHD1 332 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-224ENST00000545688 GPRASP1Q5JY77 1395 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 ANKRD30BQ9BXX2 1392 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 RGPD8O14715 1765 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-224ENST00000545688 PPLO60437 1756 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 SBF2Q86WG5 1849 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 IGHV3-38A0A0C4DH36 116 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 MTMR11A4FU01 709 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 SLC1A7O00341 560 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 ADAM20O43506 726 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 ECE2O60344 883 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 ABCB1P08183 1280 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-224ENST00000545688 SELEP16581 610 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 ASCL1P50553 236 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 SIM2Q14190 667 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-224ENST00000545688 ZNF146Q15072 292 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 OR4C11Q6IEV9 310 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 CTR9Q6PD62 1173 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 LRTM2Q8N967 370 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 OR52B6Q8NGF0 335 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 PROX1Q92786 737 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 MUS81Q96NY9 551 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 PRAM1Q96QH2 718 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 PSMB7Q99436 277 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 GSN-AS1Q9NRJ2 163 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 NLGN3Q9NZ94 848 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 MAGED1Q9Y5V3 778 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-224ENST00000545688 POLR3AO14802 1390 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-224ENST00000545688 CRB1P82279 1406 aa3.61□□□□□ -1.83
SNHG1-224ENST00000545688 IGHV3-20A0A0C4DH32 117 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 hCG_1809904A0A1W2PP81 198 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 A0A1W2PPE2 198 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 A0A1W2PR64 198 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 ZNF840PA6NDX5 716 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 GLTPD2A6NH11 291 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 ATP6AP2O75787 350 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 ATP5BP06576 529 aaKnown RBP3.6□□□□□ -1.83
SNHG1-224ENST00000545688 LMAN1P49257 510 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 TRA2BP62995 288 aaKnown RBP3.6□□□□□ -1.83
SNHG1-224ENST00000545688 FKBP3Q00688 224 aaKnown RBP3.6□□□□□ -1.83
SNHG1-224ENST00000545688 PTPRCAPQ14761 206 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 NONOQ15233 471 aaKnown RBP eCLIP3.6□□□□□ -1.83
SNHG1-224ENST00000545688 ALDH1L2Q3SY69 923 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 FAM182AQ5T1J6 154 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 ZBTB49Q6ZSB9 765 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 RNF130Q86XS8 419 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 RCOR2Q8IZ40 523 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 TC2NQ8N9U0 490 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 CHURC1Q8WUH1 139 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 OTUB1Q96FW1 271 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-224ENST00000545688 DNAJC4Q9NNZ3 241 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 HACD3Q9P035 362 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 SNX8Q9Y5X2 465 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 BRD4O60885 1362 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-224ENST00000545688 TULP4Q9NRJ4 1543 aa3.6□□□□□ -1.83
SNHG1-224ENST00000545688 RPS6KA5O75582 802 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 GSRP00390 522 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 AZGP1P25311 298 aaKnown RBP3.59□□□□□ -1.83
SNHG1-224ENST00000545688 PCGF2P35227 344 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 ATP4BP51164 291 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 CCR3P51677 355 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 NDST2P52849 883 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 OR1D5P58170 312 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 VITQ6UXI7 678 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 DET1Q7L5Y6 550 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 CENPVQ7Z7K6 275 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-224ENST00000545688 GPD1LQ8N335 351 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 RYBPQ8N488 228 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-224ENST00000545688 TCEANCQ8N8B7 351 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-224ENST00000545688 ROBO4Q8WZ75 1007 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 TSACCQ96A04 125 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-224ENST00000545688 BTBD9Q96Q07 612 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 JPT2Q9H910 190 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 PIH1D3Q9NQM4 214 aaKnown RBP3.59□□□□□ -1.83
SNHG1-224ENST00000545688 TBC1D13Q9NVG8 400 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 ANAPC2Q9UJX6 822 aa3.59□□□□□ -1.83
SNHG1-224ENST00000545688 EIF3AQ14152 1382 aaKnown RBP3.59□□□□□ -1.83
SNHG1-224ENST00000545688 ADGRB1O14514 1584 aa3.59□□□□□ -1.84
SNHG1-224ENST00000545688 LRRC37A3O60309 1634 aa3.59□□□□□ -1.84
SNHG1-224ENST00000545688 IFT172Q9UG01 1749 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 KIF1BO60333 1816 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 A0A087WWV3 80 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 TRAV24A0A0B4J272 114 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 EDDM13A0A1B0GTR0 161 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 TRAFD1O14545 582 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-224ENST00000545688 SPRY1O43609 319 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-224ENST00000545688 CYTIPO60759 359 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 ZNF354AO60765 605 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-224ENST00000545688 PCP11498 1178 aaKnown RBP3.58□□□□□ -1.84
SNHG1-224ENST00000545688 PRG2P13727 222 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 EDNRAP25101 427 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 CETN2P41208 172 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 KHKP50053 298 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 LETM2Q2VYF4 491 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 CYB5D1Q6P9G0 228 aa3.58□□□□□ -1.84
SNHG1-224ENST00000545688 TTC30BQ8N4P2 665 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms