RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	ARHGAP40	Q5TG30	622 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	OR4C11	Q6IEV9	310 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	RHBDD2	Q6NTF9	364 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	NIPAL1	Q6NVV3	410 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	ABHD17C	Q6PCB6	329 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	RGS9BP	Q6ZS82	235 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	ZFAND4	Q86XD8	727 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	WDR75	Q8IWA0	830 aa	Known RBP	9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	OR2L5	Q8NG80	312 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	OR9A4	Q8NGU2	314 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	PIWIL2	Q8TC59	973 aa	Known RBP	9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	PROKR1	Q8TCW9	393 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	TUBGCP3	Q96CW5	907 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	C19orf60	Q96EN9	201 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	C10orf90	Q96M02	699 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	QRFPR	Q96P65	431 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	KCNC2	Q96PR1	638 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	CCT7	Q99832	543 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	TBCD	Q9BTW9	1192 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	NUF2	Q9BZD4	464 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	ACPT	Q9BZG2	426 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	B3GNT4	Q9C0J1	378 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	ROGDI	Q9GZN7	287 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	RIC8B	Q9NVN3	520 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	PSD3	Q9NYI0	1048 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	VTI1B	Q9UEU0	232 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	PADI1	Q9ULC6	663 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	NAALAD2	Q9Y3Q0	740 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	PCDHGA7	Q9Y5G6	932 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	PTGDR2	Q9Y5Y4	395 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	DMXL1	Q9Y485	3027 aa		9.65	□□□□□ -0.86
CPSF7-221	ENST00000543545	TEX51	A0A1B0GUA7	166 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	ATP6AP2	A0A1C7CYW4	349 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	TRPC5OS	A6NMA1	111 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	STMND1	H3BQB6	276 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	HDAC3	O15379	428 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	FOXS1	O43638	330 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	B3GALT2	O43825	422 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	PEX11A	O75192	247 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	SEC22B	O75396	215 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	RDH16	O75452	317 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	ATP6AP2	O75787	350 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	MED26	O95402	600 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	TBX6	O95947	436 aa	Predicted RBP	9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	KLK1	P06870	262 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	FBL	P22087	321 aa	Known RBP	9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	CD82	P27701	267 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	MTTP	P55157	894 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	GNGT1	P63211	74 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	OLR1	P78380	273 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	MAT1A	Q00266	395 aa	Known RBP	9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	ACSM2A	Q08AH3	577 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	ADPRM	Q3LIE5	342 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	GALNTL6	Q49A17	601 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	MLIP	Q5VWP3	458 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	ACSM2B	Q68CK6	577 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	NXN	Q6DKJ4	435 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	PRMT9	Q6P2P2	845 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	CYP20A1	Q6UW02	462 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	PAGE2	Q7Z2X7	111 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	TRIM46	Q7Z4K8	759 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	UBE3D	Q7Z6J8	389 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	DTWD1	Q8N5C7	304 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	ESX1	Q8N693	406 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	SLC38A9	Q8NBW4	561 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	MVB12A	Q96EY5	273 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	THOC1	Q96FV9	657 aa	Known RBP	9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	PPP3R2	Q96LZ3	170 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	SORBS1	Q9BX66	1292 aa	Known RBP	9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	MRPL1	Q9BYD6	325 aa	Known RBP	9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	AICDA	Q9GZX7	198 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	TUBB1	Q9H4B7	451 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	LRTM1	Q9HBL6	345 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	ZNF304	Q9HCX3	659 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	ENAM	Q9NRM1	1142 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	HCN3	Q9P1Z3	774 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	IFT80	Q9P2H3	777 aa	Predicted RBP	9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	TRPC4	Q9UBN4	977 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	GPN3	Q9UHW5	284 aa	Predicted RBP	9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	HAO1	Q9UJM8	370 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	ANGPTL2	Q9UKU9	493 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	PPT2	Q9UMR5	302 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	WASF3	Q9UPY6	502 aa		9.64	□□□□□ -0.87
CPSF7-221	ENST00000543545	SERTM1	A2A2V5	107 aa		9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545	CDRT15L2	A8MXV6	281 aa		9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545		C9J4A7	227 aa		9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545		H0YIG0	161 aa		9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545	PSMD12	O00232	456 aa	Predicted RBP	9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545	PLPP1	O14494	284 aa		9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545	RAD1	O60671	282 aa		9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545	GALR3	O60755	368 aa	Predicted RBP	9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545	EDF1	O60869	148 aa	Known RBP	9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545	DIAPH2	O60879	1101 aa		9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545	VPS4B	O75351	444 aa		9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545	RSL1D1	O76021	490 aa	Known RBP	9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545	DXO	O77932	396 aa	Known RBP	9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545	SEMA3D	O95025	777 aa		9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545	NSA2	O95478	260 aa	Known RBP	9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545	GBA	P04062	536 aa		9.63	□□□□□ -0.87
CPSF7-221	ENST00000543545	SMIM10L1	P0DMW3	83 aa		9.63	□□□□□ -0.87

Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms