RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 A0A1W2PPH5 198 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 STX16-NPEPL1H3BU86 382 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 AGPSO00116 658 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 PLK4O00444 970 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 STX16O14662 325 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 PGRMC2O15173 223 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 CAPN5O15484 640 aaPredicted RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 RENP00797 406 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 CD40LGP29965 261 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 PRDX6P30041 224 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF41P51814 821 aaPredicted RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 ID2Q02363 134 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 SHHQ15465 462 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 KIAA0319Q5VV43 1072 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC25A24Q6NUK1 477 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 PQLC1Q8N2U9 271 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 CPXM2Q8N436 756 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 C7orf57Q8NEG2 295 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 KBTBD8Q8NFY9 601 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 FAR1Q8WVX9 515 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 DAZLQ92904 295 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 EPB41L1Q9H4G0 881 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 RNF121Q9H920 327 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 SMURF2Q9HAU4 748 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 RASSF1Q9NS23 344 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 DLGAP4Q9Y2H0 992 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 MYO7AQ13402 2215 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 KHNYNO15037 678 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC16A5O15375 505 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 CHST10O43529 356 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 CDC123O75794 336 aaPredicted RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 MT-ND1P03886 318 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 GBAP04062 536 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 LINGO3P0C6S8 592 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 MPC1LP0DKB6 136 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 RNH1P13489 461 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 AFF1P51825 1210 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 WNT7BP56706 349 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 ELF3P78545 371 aaPredicted RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC7A9P82251 487 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 DSC1Q08554 894 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 BLMHQ13867 455 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 HABP2Q14520 560 aaPredicted RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 DEFB134Q4QY38 66 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 LCN1P1Q5VSP4 162 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 TRAF7Q6Q0C0 670 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 HTR3DQ70Z44 454 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 ZDHHC21Q8IVQ6 265 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 DEFB123Q8N688 67 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 CSNK1A1LQ8N752 337 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 RNF38Q9H0F5 515 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 CDH22Q9UJ99 828 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 TRPM3Q9HCF6 1732 aaPredicted RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 C5P01031 1676 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 AKR7A3O95154 331 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 ALOX12P18054 663 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 GALK1P51570 392 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 RAB14P61106 215 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF763Q0D2J5 394 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 GRM7Q14831 915 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 LILRB2Q8N423 598 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 GRHL3Q8TE85 626 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 NXPE3Q969Y0 559 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 ARMC5Q96C12 935 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF689Q96CS4 500 aaPredicted RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 PGAP3Q96FM1 320 aaPredicted RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF347Q96SE7 839 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 CITED1Q99966 193 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 MRPS26Q9BYN8 205 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 AKTIPQ9H8T0 292 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 C11orf16Q9NQ32 467 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 ZDHHC18Q9NUE0 388 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 B4GALT7Q9UBV7 327 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 REV1Q9UBZ9 1251 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 FZD4Q9ULV1 537 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 RNF11Q9Y3C5 154 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 SIT1Q9Y3P8 196 aa6.66□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM92AA1XBS5 289 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 AHSA1O95433 338 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 SERPINA1P01009 418 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 C1GALT1C1LP0DN25 315 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 PRKAR1BP31321 381 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 CAPGP40121 348 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 MNDAP41218 407 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 CCT3P49368 545 aaKnown RBP6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 RGS19P49795 217 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 ETV1P50549 477 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 MRPS21P82921 87 aaKnown RBP6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 AADACL4Q5VUY2 407 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 TTLL10Q6ZVT0 673 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 ADGRD2Q7Z7M1 963 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 UBE2J2Q8N2K1 259 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 RLN3Q8WXF3 142 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 LRRC3Q9BY71 257 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 OR51V1Q9H2C8 321 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 B3GAT2Q9NPZ5 323 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 SLAMF7Q9NQ25 335 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 FKBP14Q9NWM8 211 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 TAS2R9Q9NYW1 312 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 CRNNQ9UBG3 495 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms