RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TFEBP19484 476 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 CDK11BP21127 795 aaKnown RBP4.32□□□□□ -1.72
SNHG1-214ENST00000540865 HSD3B2P26439 372 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 PKLRP30613 574 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 SLC26A3P40879 764 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 GRIA3P42263 894 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 NUP107P57740 925 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 VSX2P58304 361 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-214ENST00000540865 XIAPP98170 497 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 OC90Q02509 493 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-214ENST00000540865 PLOD1Q02809 727 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-214ENST00000540865 FASTKQ14296 549 aaKnown RBP4.32□□□□□ -1.72
SNHG1-214ENST00000540865 PDK1Q15118 436 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 KRT31Q15323 416 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 SLC1A5Q15758 541 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 EXT1Q16394 746 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 MAPKAPK3Q16644 382 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 CR1LQ2VPA4 569 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 PRTGQ2VWP7 1150 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 GPR33Q49SQ1 333 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 TEX44Q53QW1 395 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 TM4SF20Q53R12 229 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 TMEM177Q53S58 311 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 CMPK2Q5EBM0 449 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 CT47A1Q5JQC4 288 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-214ENST00000540865 FCRLBQ6BAA4 426 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 UNC5DQ6UXZ4 953 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 CPEB2Q7Z5Q1 589 aaKnown RBP4.32□□□□□ -1.72
SNHG1-214ENST00000540865 CRLF3Q8IUI8 442 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 PHC2Q8IXK0 858 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 SLC25A41Q8N5S1 370 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 SLC5A8Q8N695 610 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 M1APQ8TC57 530 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 METTL21AQ8WXB1 218 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 SIGLEC10Q96LC7 697 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 C10orf90Q96M02 699 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 TEKT5Q96M29 485 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 PWWP2AQ96N64 755 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 SECISBP2Q96T21 854 aaKnown RBP4.32□□□□□ -1.72
SNHG1-214ENST00000540865 C19orf43Q9BQ61 176 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 YIPF4Q9BSR8 244 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 BDH2Q9BUT1 245 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 FICDQ9BVA6 458 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 PLEKHF2Q9H8W4 249 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 KCNK13Q9HB14 408 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 MKKSQ9NPJ1 570 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-214ENST00000540865 DMRT3Q9NQL9 472 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 ANKRD10Q9NXR5 420 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 MYO1AQ9UBC5 1043 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 TRPC4Q9UBN4 977 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 C19orf25Q9UFG5 118 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-214ENST00000540865 MYO6Q9UM54 1294 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 TDRKHQ9Y2W6 561 aaKnown RBP4.32□□□□□ -1.72
SNHG1-214ENST00000540865 TRBV5-4A0A0C4DH59 114 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 C5orf60A6NFR6 353 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 ZNF487B1APH4 448 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 H7C1Q1 480 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 ACOT7O00154 380 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 MYO1FO00160 1098 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 SYT5O00445 386 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 SCDO00767 359 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 CTSVO60911 334 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 CRLF1O75462 422 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 SEC24DO94855 1032 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-214ENST00000540865 AP2A2O94973 939 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 PLA2G1BP04054 148 aaKnown RBP4.31□□□□□ -1.72
SNHG1-214ENST00000540865 ANXA5P08758 320 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 ERVK-10P10266 1014 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 CD53P19397 219 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 ITGALP20701 1170 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 CD9P21926 228 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 SSR1P43307 286 aaKnown RBP4.31□□□□□ -1.72
SNHG1-214ENST00000540865 ZFP36L2P47974 494 aaKnown RBP4.31□□□□□ -1.72
SNHG1-214ENST00000540865 LINC00310P59036 64 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 DCAF7P61962 342 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 PTPRCAPQ14761 206 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 PCBP2Q15366 365 aaKnown RBP eCLIP4.31□□□□□ -1.72
SNHG1-214ENST00000540865 TAF1AQ15573 450 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-214ENST00000540865 VMACQ2NL98 169 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 BTBD16Q32M84 506 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 DPCR1Q3MIW9 517 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 FLYWCH1Q4VC44 716 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 DNAJC21Q5F1R6 531 aaKnown RBP4.31□□□□□ -1.72
SNHG1-214ENST00000540865 FIGNQ5HY92 759 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 CATSPEREQ5SY80 951 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 FAM182AQ5T1J6 154 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 GARNL3Q5VVW2 1013 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 FRMPD2BQ6IN97 320 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 TEPPQ6URK8 271 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 PRSS57Q6UWY2 283 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 RNF44Q7L0R7 432 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 ZNF571Q7Z3V5 609 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-214ENST00000540865 SNX20Q7Z614 316 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 TMTC1Q8IUR5 882 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 LRRC75A-AS1Q8N1F1 130 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 CIARTQ8N365 385 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-214ENST00000540865 RPRMLQ8N4K4 120 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 AMER2Q8N7J2 671 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 PLD5Q8N7P1 536 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 AMER3Q8N944 861 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms