RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 ADAMTS6Q9UKP5 1117 aa7.6□□□□□ -1.19
CD4-209ENST00000539492 NEU2Q9Y3R4 380 aa7.6□□□□□ -1.19
CD4-209ENST00000539492 NIPBLQ6KC79 2804 aaeCLIP7.6□□□□□ -1.19
CD4-209ENST00000539492 IGKV3D-11A0A0A0MRZ8 115 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 A0A1B0GTH9 108 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 TCRBV16S1A1N1A0A5B0 115 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 PABPN1LA6NDY0 278 aaKnown RBP7.59□□□□□ -1.19
CD4-209ENST00000539492 URADA6NGE7 173 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 USP27XA6NNY8 438 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 PSMD12O00232 456 aaPredicted RBP7.59□□□□□ -1.19
CD4-209ENST00000539492 OR1F1O43749 312 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 CDC40O60508 579 aaKnown RBP eCLIP7.59□□□□□ -1.19
CD4-209ENST00000539492 HAUS5O94927 633 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 KRT14P02533 472 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 SERPIND1P05546 499 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 HIST1H2AGP0C0S8 130 aaPredicted RBP7.59□□□□□ -1.19
CD4-209ENST00000539492 ZNF888P0CJ79 500 aaPredicted RBP7.59□□□□□ -1.19
CD4-209ENST00000539492 RNH1P13489 461 aaKnown RBP7.59□□□□□ -1.19
CD4-209ENST00000539492 TFEBP19484 476 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 HIST1H2ADP20671 130 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 MSX1P28360 303 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 CHRNB4P30926 498 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 AHRP35869 848 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 MAGEA3P43357 314 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 SCTRP47872 440 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 AP1S2P56377 157 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 TIAL1Q01085 375 aaKnown RBP eCLIP7.59□□□□□ -1.19
CD4-209ENST00000539492 TFF3Q07654 80 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 PHKG1Q16816 387 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 KCTD19Q17RG1 926 aaPredicted RBP7.59□□□□□ -1.19
CD4-209ENST00000539492 CMPK2Q5EBM0 449 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 DUPD1Q68J44 220 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 ARHGAP11AQ6P4F7 1023 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 SULF2Q8IWU5 870 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 CYP4Z2PQ8N1L4 340 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 MARVELD2Q8N4S9 558 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 ZFP62Q8NB50 900 aaPredicted RBP7.59□□□□□ -1.19
CD4-209ENST00000539492 C2CD4AQ8NCU7 369 aaPredicted RBP7.59□□□□□ -1.19
CD4-209ENST00000539492 ARMC2Q8NEN0 867 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 NFAM1Q8NET5 270 aaPredicted RBP7.59□□□□□ -1.19
CD4-209ENST00000539492 OR56A3Q8NH54 315 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 LILRB4Q8NHJ6 448 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 C16orf52Q8NHV5 167 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 GABPB2Q8TAK5 448 aaPredicted RBP7.59□□□□□ -1.19
CD4-209ENST00000539492 EEF1AKMT1Q8WVE0 214 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 RND1Q92730 232 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 LINGO1Q96FE5 620 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 SNF8Q96H20 258 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 HIST1H2AHQ96KK5 128 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 NDNQ99608 321 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 HIST1H2AJQ99878 128 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 H2AFJQ9BTM1 129 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 RBSNQ9H1K0 784 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 PRDM9Q9NQV7 894 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 NPDC1Q9NQX5 325 aaPredicted RBP7.59□□□□□ -1.19
CD4-209ENST00000539492 PLSCR2Q9NRY7 297 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 IARS2Q9NSE4 1012 aaKnown RBP7.59□□□□□ -1.19
CD4-209ENST00000539492 ARL15Q9NXU5 204 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 TAS2R13Q9NYV9 303 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 TNFRSF10DQ9UBN6 386 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 ZFP69BQ9UJL9 534 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 MMACHCQ9Y4U1 282 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 MAD1L1Q9Y6D9 718 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 TLN2Q9Y4G6 2542 aa7.59□□□□□ -1.19
CD4-209ENST00000539492 TRBV11-1A0A0K0K1C0 115 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 FAM90A27PA6NNH2 459 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 GOLGA6L6A8MZA4 724 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 GOLGA8MH3BSY2 632 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 PEX1O43933 1283 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 HS6ST1O60243 411 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 DNAJB6O75190 326 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 B3GALT4O96024 378 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 MAOAP21397 527 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 CDC25BP30305 580 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 RFC3P40938 356 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 CLCN2P51788 898 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 BTG2P78543 158 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 REEP5Q00765 189 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 TERF2Q15554 542 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 HSP90AA5PQ58FG0 334 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 PAQR3Q6TCH7 311 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 KIAA0408Q6ZU52 694 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 CEP128Q6ZU80 1094 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 DMRTC2Q8IXT2 367 aaPredicted RBP7.58□□□□□ -1.2
CD4-209ENST00000539492 AGGF1Q8N302 714 aaeCLIP7.58□□□□□ -1.2
CD4-209ENST00000539492 TMEM156Q8N614 296 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 SPC24Q8NBT2 197 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.58□□□□□ -1.2
CD4-209ENST00000539492 APCDD1LQ8NCL9 501 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 B3GNT7Q8NFL0 401 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 UTP15Q8TED0 518 aaKnown RBP7.58□□□□□ -1.2
CD4-209ENST00000539492 SLC5A11Q8WWX8 675 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 ATL1Q8WXF7 558 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 PYCR2Q96C36 320 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 FBXL8Q96CD0 374 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 VMP1Q96GC9 406 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 SIGLEC10Q96LC7 697 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 OR4K3Q96R72 315 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 TRIM54Q9BYV2 358 aa7.58□□□□□ -1.2
CD4-209ENST00000539492 SLC6A16Q9GZN6 736 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms