RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ANKRD53Q8N9V6 530 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 FAM98AQ8NCA5 519 aaKnown RBP11.73□□□□□ -0.53
VAMP1-206ENST00000538970 CFAP36Q96G28 342 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 PDLIM5Q96HC4 596 aaKnown RBP11.73□□□□□ -0.53
VAMP1-206ENST00000538970 PWWP2AQ96N64 755 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 PTCHD1Q96NR3 888 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 CDCP1Q9H5V8 836 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 PELI2Q9HAT8 420 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 CHST11Q9NPF2 352 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 LRFN1Q9P244 771 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 CHMP2BQ9UQN3 213 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 VWA7Q9Y334 891 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 DNHD1Q96M86 4753 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 TCRBV16S1A1N1A0A5B0 115 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 C4orf51C9J302 202 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 NPIPA5E9PKD4 350 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 NME2P1O60361 137 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 PRMT3O60678 531 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 SLC25A12O75746 678 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 SMIM10L1P0DMW3 83 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 ESRRAP11474 423 aaPredicted RBP11.72□□□□□ -0.53
VAMP1-206ENST00000538970 AGAP20933 346 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 MAOAP21397 527 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 NME2P22392 152 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 RAB8AP61006 207 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 BTG2P78543 158 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 MORF4L2Q15014 288 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 XKRXQ6PP77 449 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.72□□□□□ -0.53
VAMP1-206ENST00000538970 TMPRSS11BQ86T26 416 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 THOC6Q86W42 341 aaKnown RBP11.72□□□□□ -0.53
VAMP1-206ENST00000538970 SPPL2CQ8IUH8 684 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 PDIK1LQ8N165 341 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 TRPV3Q8NET8 790 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 SMIM10Q96HG1 83 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 TRIM51Q9BSJ1 452 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 TRIM45Q9H8W5 580 aaPredicted RBP11.72□□□□□ -0.53
VAMP1-206ENST00000538970 CLK4Q9HAZ1 481 aaKnown RBP11.72□□□□□ -0.53
VAMP1-206ENST00000538970 NPIPA1Q9UND3 350 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 MEMO1Q9Y316 297 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 DYRK1BQ9Y463 629 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 TEX264Q9Y6I9 313 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 SCN2AQ99250 2005 aa11.72□□□□□ -0.53
VAMP1-206ENST00000538970 SCN3AQ9NY46 2000 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 NPEPPSL1A6NEC2 478 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 URADA6NGE7 173 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 CDC7O00311 574 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 RNH1P13489 461 aaKnown RBP11.71□□□□□ -0.53
VAMP1-206ENST00000538970 COX6B1P14854 86 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 ZNF24P17028 368 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 TRHRP34981 398 aaPredicted RBP11.71□□□□□ -0.53
VAMP1-206ENST00000538970 HNF4AP41235 474 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 SMSP52788 366 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 MLF1P58340 268 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 FRG1Q14331 258 aaKnown RBP11.71□□□□□ -0.53
VAMP1-206ENST00000538970 RNFT1Q5M7Z0 435 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 NXPE4Q6UWF7 544 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 GDF7Q7Z4P5 450 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 ZNF227Q86WZ6 799 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 CHERPQ8IWX8 916 aaKnown RBP11.71□□□□□ -0.53
VAMP1-206ENST00000538970 CYP4X1Q8N118 509 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 CA13Q8N1Q1 262 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 ARMC10Q8N2F6 343 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 NFAM1Q8NET5 270 aaPredicted RBP11.71□□□□□ -0.53
VAMP1-206ENST00000538970 ADAMTS18Q8TE60 1221 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 CREB3L4Q8TEY5 395 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 LRRC39Q96DD0 335 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 AIF1LQ9BQI0 150 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 AICDAQ9GZX7 198 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 KLHL31Q9H511 634 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 NECTIN3Q9NQS3 549 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 PRDM9Q9NQV7 894 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 SLC22A14Q9Y267 594 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 PSAT1Q9Y617 370 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 KCNE2Q9Y6J6 123 aa11.71□□□□□ -0.53
VAMP1-206ENST00000538970 FBN3Q75N90 2809 aa11.71□□□□□ -0.54
VAMP1-206ENST00000538970 PSMD12O00232 456 aaPredicted RBP11.7□□□□□ -0.54
VAMP1-206ENST00000538970 ASNA1O43681 348 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 SERPINA6P08185 405 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 SNRPB2P08579 225 aaKnown RBP11.7□□□□□ -0.54
VAMP1-206ENST00000538970 SAT1P21673 171 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 CYB561P49447 251 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 ITGA8P53708 1063 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 CDKL1Q00532 357 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 HSF1Q00613 529 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 ZNF460Q14592 562 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 RBBP5Q15291 538 aaKnown RBP11.7□□□□□ -0.54
VAMP1-206ENST00000538970 CDSNQ15517 529 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 MAPKAPK3Q16644 382 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 TOR1AIP1Q5JTV8 583 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 NCCRP1Q6ZVX7 275 aaPredicted RBP11.7□□□□□ -0.54
VAMP1-206ENST00000538970 ZC3HC1Q86WB0 502 aaKnown RBP11.7□□□□□ -0.54
VAMP1-206ENST00000538970 GHDCQ8N2G8 530 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 NKAPQ8N5F7 415 aaKnown RBP11.7□□□□□ -0.54
VAMP1-206ENST00000538970 CPSF7Q8N684 471 aaKnown RBP11.7□□□□□ -0.54
VAMP1-206ENST00000538970 ANKRD7Q92527 254 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 LURAP1Q96LR2 239 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 TRIM8Q9BZR9 551 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 RHBGQ9H310 441 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 ZFATQ9P243 1243 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms