RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 GBAP04062 536 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 GP1BAP07359 652 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 ZNF888P0CJ79 500 aaPredicted RBP13.47□□□□□ -0.25
CD4-208ENST00000538827 THRAP10827 490 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 G6PDP11413 515 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 PIK3R1P27986 724 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 ATP4BP51164 291 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 RAB8AP61006 207 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 TGM3Q08188 693 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 TBL3Q12788 808 aaKnown RBP13.47□□□□□ -0.25
CD4-208ENST00000538827 KLF10Q13118 480 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 GSTA3Q16772 222 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 SMU1Q2TAY7 513 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 HKDC1Q2TB90 917 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 DEPDC1Q5TB30 811 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 CYP20A1Q6UW02 462 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 GK5Q6ZS86 529 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 NUDT13Q86X67 352 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 METTL4Q8N3J2 472 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 DNAJC22Q8N4W6 341 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 FITM2Q8N6M3 262 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 KCT2Q8NC54 265 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 RCBTB1Q8NDN9 531 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 OR4D9Q8NGE8 314 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 GAL3ST3Q96A11 431 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 RGMAQ96B86 450 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 TSSK3Q96PN8 268 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 CDC6Q99741 560 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 KLHL31Q9H511 634 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 ZNF768Q9H5H4 540 aaKnown RBP13.47□□□□□ -0.25
CD4-208ENST00000538827 ZNF385DQ9H6B1 395 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 FANCEQ9HB96 536 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 PPT2Q9UMR5 302 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 MSRB2Q9Y3D2 182 aa13.47□□□□□ -0.25
CD4-208ENST00000538827 IGSF10Q6WRI0 2623 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 IGHV5-10-1A0A0J9YXX1 117 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 URADA6NGE7 173 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 TMEM150CB9EJG8 249 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 C4orf51C9J302 202 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 C9JVG2 144 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 NPIPB8E9PQR5 432 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 PSMD12O00232 456 aaPredicted RBP13.46□□□□□ -0.25
CD4-208ENST00000538827 NR5A2O00482 541 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 RFPL3O75679 317 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 UBOX5O94941 541 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 ZIC2O95409 532 aaPredicted RBP13.46□□□□□ -0.25
CD4-208ENST00000538827 TBX6O95947 436 aaPredicted RBP13.46□□□□□ -0.25
CD4-208ENST00000538827 PRPS2P11908 318 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 BCKDHAP12694 445 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 SDC1P18827 310 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 HSD11B2P80365 405 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 RELAQ04206 551 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 HYAL2Q12891 473 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 PWP1Q13610 501 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 GPR19Q15760 415 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 CLPPQ16740 277 aaPredicted RBP13.46□□□□□ -0.25
CD4-208ENST00000538827 PDCD4Q53EL6 469 aaKnown RBP13.46□□□□□ -0.25
CD4-208ENST00000538827 TMEM35AQ53FP2 167 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 AGKQ53H12 422 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 NOXRED1Q6NXP6 359 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 PAOXQ6QHF9 649 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 ZNF574Q6ZN55 896 aaPredicted RBP13.46□□□□□ -0.25
CD4-208ENST00000538827 RIPOR1Q6ZS17 1223 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 PAGE2Q7Z2X7 111 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 KMT5CQ86Y97 462 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 CPSF7Q8N684 471 aaKnown RBP13.46□□□□□ -0.25
CD4-208ENST00000538827 TTC29Q8NA56 475 aaPredicted RBP13.46□□□□□ -0.25
CD4-208ENST00000538827 OR2L5Q8NG80 312 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 OR9I1Q8NGQ6 314 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 CHTF18Q8WVB6 975 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 MS4A6EQ96DS6 147 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 FCRL1Q96LA6 429 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 CCDC106Q9BWC9 280 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 SLC6A16Q9GZN6 736 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 AICDAQ9GZX7 198 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 ASIC5Q9NY37 505 aa13.46□□□□□ -0.25
CD4-208ENST00000538827 SCN3AQ9NY46 2000 aa13.46□□□□□ -0.26
CD4-208ENST00000538827 COL27A1Q8IZC6 1860 aaPredicted RBP13.45□□□□□ -0.26
CD4-208ENST00000538827 LRIT2A6NDA9 550 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 EIF4E1BA6NMX2 242 aaKnown RBP13.45□□□□□ -0.26
CD4-208ENST00000538827 CBFA2T3O75081 653 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 EEDO75530 441 aaKnown RBP13.45□□□□□ -0.26
CD4-208ENST00000538827 LRATO95237 230 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 B3GALT4O96024 378 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 KLK1P06870 262 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 CTSBP07858 339 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 ANXA4P09525 319 aaPredicted RBP13.45□□□□□ -0.26
CD4-208ENST00000538827 CERS1P27544 350 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 RAE1P78406 368 aaKnown RBP13.45□□□□□ -0.26
CD4-208ENST00000538827 BTN3A2P78410 334 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 ZNF763Q0D2J5 394 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 SQSTM1Q13501 440 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 PTGR1Q14914 329 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 KIAA0040Q15053 153 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 ZSCAN26Q16670 478 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 WASHC2DQ5SRD0 308 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 CCNYL2Q5T2Q4 361 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 CCDC121Q6ZUS5 278 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 ABHD13Q7L211 337 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 ZNF771Q7L3S4 317 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms