RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 ZNF623O75123 536 aa17.14■□□□□ 0.33
TRA2A-211ENST00000538367 HOXD4P09016 255 aaPredicted RBP17.14■□□□□ 0.33
TRA2A-211ENST00000538367 SNRPGP62308 76 aaKnown RBP17.14■□□□□ 0.33
TRA2A-211ENST00000538367 HMGCS1Q01581 520 aa17.14■□□□□ 0.33
TRA2A-211ENST00000538367 SLC14A1Q13336 389 aa17.14■□□□□ 0.33
TRA2A-211ENST00000538367 C1DQ13901 141 aaKnown RBP17.14■□□□□ 0.33
TRA2A-211ENST00000538367 PDE12Q6L8Q7 609 aaKnown RBP17.14■□□□□ 0.33
TRA2A-211ENST00000538367 ARSKQ6UWY0 536 aa17.14■□□□□ 0.33
TRA2A-211ENST00000538367 GET4Q7L5D6 327 aaPredicted RBP17.14■□□□□ 0.33
TRA2A-211ENST00000538367 IFNL1Q8IU54 200 aa17.14■□□□□ 0.33
TRA2A-211ENST00000538367 OR8H3Q8N146 312 aa17.14■□□□□ 0.33
TRA2A-211ENST00000538367 STK40Q8N2I9 435 aa17.14■□□□□ 0.33
TRA2A-211ENST00000538367 PLA2G15Q8NCC3 412 aa17.14■□□□□ 0.33
TRA2A-211ENST00000538367 PROKR2Q8NFJ6 384 aa17.14■□□□□ 0.33
TRA2A-211ENST00000538367 VANGL1Q8TAA9 524 aaPredicted RBP17.14■□□□□ 0.33
TRA2A-211ENST00000538367 UTP15Q8TED0 518 aaKnown RBP17.14■□□□□ 0.33
TRA2A-211ENST00000538367 MSANTD3Q96H12 275 aa17.14■□□□□ 0.33
TRA2A-211ENST00000538367 RADILQ96JH8 1075 aa17.14■□□□□ 0.33
TRA2A-211ENST00000538367 KLHL5Q96PQ7 755 aa17.14■□□□□ 0.33
TRA2A-211ENST00000538367 ZC4H2Q9NQZ6 224 aa17.14■□□□□ 0.33
TRA2A-211ENST00000538367 ZMAT5Q9UDW3 170 aaKnown RBP17.14■□□□□ 0.33
TRA2A-211ENST00000538367 NDRG2Q9UN36 371 aaKnown RBP17.14■□□□□ 0.33
TRA2A-211ENST00000538367 ZAR1LA6NP61 321 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 H3BM21 787 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 NIPSNAP2O75323 286 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 PCGF2P35227 344 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 GBX2P52951 348 aaPredicted RBP17.13■□□□□ 0.33
TRA2A-211ENST00000538367 SREBF2Q12772 1141 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 SMARCB1Q12824 385 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 PTPRCAPQ14761 206 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 TEAD4Q15561 434 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 FAM92BQ6ZTR7 304 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRA2A-211ENST00000538367 SLC37A3Q8NCC5 494 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 ZNF431Q8TF32 576 aaPredicted RBP17.13■□□□□ 0.33
TRA2A-211ENST00000538367 COPS5Q92905 334 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 SORCS2Q96PQ0 1159 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 PPP1R3EQ9H7J1 279 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 THSD1Q9NS62 852 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 MPP6Q9NZW5 540 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 ATPIF1Q9UII2 106 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 TMCC3Q9ULS5 477 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 OARD1Q9Y530 152 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 DOCK4Q8N1I0 1966 aa17.13■□□□□ 0.33
TRA2A-211ENST00000538367 MYBPHLA2RUH7 354 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 CSO75390 466 aaKnown RBP17.12■□□□□ 0.33
TRA2A-211ENST00000538367 CDRT1O95170 752 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 ENGP17813 658 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 AKAP5P24588 427 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 PCSK1P29120 753 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 KIR3DL1P43629 444 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 ARHGAP1Q07960 439 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 HNRNPA0Q13151 305 aaKnown RBP17.12■□□□□ 0.33
TRA2A-211ENST00000538367 KLHL17Q6TDP4 642 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 TMEM107Q6UX40 140 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 CTU1Q7Z7A3 348 aaKnown RBP17.12■□□□□ 0.33
TRA2A-211ENST00000538367 LGI4Q8N135 537 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 OR7G3Q8NG95 312 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 ZBED6CLQ96FA7 236 aaPredicted RBP17.12■□□□□ 0.33
TRA2A-211ENST00000538367 SEMA3CQ99985 751 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 TMEM43Q9BTV4 400 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 ZYG11BQ9C0D3 744 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 PPIL3Q9H2H8 161 aaKnown RBP17.12■□□□□ 0.33
TRA2A-211ENST00000538367 ERVMER34-1Q9H9K5 563 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 GLS2Q9UI32 602 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 CPA4Q9UI42 421 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 ZMYM5Q9UJ78 669 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 DHRS7Q9Y394 339 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 INMT-MINDY4F8WBC2 141 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 DDCP20711 480 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 LHCGRP22888 699 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 PTGER3P43115 390 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 SRSF11Q05519 484 aaKnown RBP17.12■□□□□ 0.33
TRA2A-211ENST00000538367 HSD17B12Q53GQ0 312 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 GPR142Q7Z601 462 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 FBXO16Q8IX29 292 aaPredicted RBP17.12■□□□□ 0.33
TRA2A-211ENST00000538367 ZNF683Q8IZ20 524 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.12■□□□□ 0.33
TRA2A-211ENST00000538367 FAM46DQ8NEK8 389 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 ATP6V1C2Q8NEY4 427 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 HEXA-AS1Q9H8Q6 139 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 GOLGA2P5Q9HBQ8 144 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 FAM120CQ9NX05 1096 aaKnown RBP17.12■□□□□ 0.33
TRA2A-211ENST00000538367 NDUFAF4Q9P032 175 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 FTSJ1Q9UET6 329 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 NDOR1Q9UHB4 597 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 UBQLN2Q9UHD9 624 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 RAB23Q9ULC3 237 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 CDH10Q9Y6N8 788 aa17.12■□□□□ 0.33
TRA2A-211ENST00000538367 MAGEB17A8MXT2 336 aa17.11■□□□□ 0.33
TRA2A-211ENST00000538367 SLC30A4O14863 429 aa17.11■□□□□ 0.33
TRA2A-211ENST00000538367 WDPCPO95876 746 aa17.11■□□□□ 0.33
TRA2A-211ENST00000538367 PRSS56P0CW18 603 aa17.11■□□□□ 0.33
TRA2A-211ENST00000538367 ZP3P21754 424 aa17.11■□□□□ 0.33
TRA2A-211ENST00000538367 EVI2BP34910 448 aa17.11■□□□□ 0.33
TRA2A-211ENST00000538367 CLCN7P51798 805 aa17.11■□□□□ 0.33
TRA2A-211ENST00000538367 RABGGTBP53611 331 aa17.11■□□□□ 0.33
TRA2A-211ENST00000538367 ZNF267Q14586 743 aaPredicted RBP17.11■□□□□ 0.33
TRA2A-211ENST00000538367 GALNT10Q86SR1 603 aa17.11■□□□□ 0.33
TRA2A-211ENST00000538367 Q8N402 240 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms