RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 DOC2AQ14183 400 aa16.21■□□□□ 0.19
SFSWAP-205ENST00000537164 MINDY4Q4G0A6 757 aa16.21■□□□□ 0.19
SFSWAP-205ENST00000537164 CRB2Q5IJ48 1285 aa16.21■□□□□ 0.19
SFSWAP-205ENST00000537164 ISLR2Q6UXK2 745 aa16.21■□□□□ 0.19
SFSWAP-205ENST00000537164 VN1R5Q7Z5H4 357 aa16.21■□□□□ 0.19
SFSWAP-205ENST00000537164 CPEB2Q7Z5Q1 589 aaKnown RBP16.21■□□□□ 0.19
SFSWAP-205ENST00000537164 IFT20Q8IY31 132 aa16.21■□□□□ 0.19
SFSWAP-205ENST00000537164 GAL3ST3Q96A11 431 aa16.21■□□□□ 0.19
SFSWAP-205ENST00000537164 TBC1D20Q96BZ9 403 aa16.21■□□□□ 0.19
SFSWAP-205ENST00000537164 MRRFQ96E11 262 aaKnown RBP16.21■□□□□ 0.19
SFSWAP-205ENST00000537164 PEX11GQ96HA9 241 aa16.21■□□□□ 0.19
SFSWAP-205ENST00000537164 PAFAH2Q99487 392 aa16.21■□□□□ 0.19
SFSWAP-205ENST00000537164 WDR77Q9BQA1 342 aaPredicted RBP16.21■□□□□ 0.19
SFSWAP-205ENST00000537164 MFRPQ9BY79 579 aa16.21■□□□□ 0.19
SFSWAP-205ENST00000537164 SLAMF7Q9NQ25 335 aa16.21■□□□□ 0.19
SFSWAP-205ENST00000537164 PTPN13Q12923 2485 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 K7EPI3 171 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 UBXN8O00124 270 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 CCNT2O60583 730 aaKnown RBP16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 B3GALT4O96024 378 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 INHBAP08476 426 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 ABHD2P08910 425 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 JAK1P23458 1154 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 HNRNPH1P31943 449 aaKnown RBP16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 HPDP32754 393 aaPredicted RBP16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 RAB8AP61006 207 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 NAA30Q147X3 362 aaPredicted RBP16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 INPP5JQ15735 1006 aaPredicted RBP16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 UAP1Q16222 522 aaPredicted RBP16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 XKR6Q5GH73 641 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 PLAG1Q6DJT9 500 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 METTL2BQ6P1Q9 378 aaKnown RBP16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 LANCL3Q6ZV70 420 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 ANKRD37Q7Z713 158 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 GALNT11Q8NCW6 608 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 MS4A6EQ96DS6 147 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 BARD1Q99728 777 aaKnown RBP16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 EPS8L2Q9H6S3 715 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 NFU1Q9UMS0 254 aa16.2■□□□□ 0.18
SFSWAP-205ENST00000537164 A0A087WUV0 522 aaPredicted RBP16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 CLEC18AA5D8T8 446 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 OR2W5A6NFC9 320 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 ANKDD1BA6NHY2 528 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 SUPT3HB4E1H0 165 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 SUPT3HO75486 399 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 KRT38O76015 456 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 ALDH18A1P54886 795 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 IRF8Q02556 426 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 CHIT1Q13231 466 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 SETDB1Q15047 1291 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 PAGE2BQ5JRK9 111 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 TOR1AIP1Q5JTV8 583 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 MFSD4BQ5TF39 518 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 CLEC18BQ6UXF7 455 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 QSOX2Q6ZRP7 698 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 CUZD1Q86UP6 607 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 IQCKQ8N0W5 287 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 SNX31Q8N9S9 440 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 CLEC18CQ8NCF0 446 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 OR2L5Q8NG80 312 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 BRIX1Q8TDN6 353 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 DCAKDQ8WVC6 231 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 EXT2Q93063 718 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 NPLQ9BXD5 320 aaPredicted RBP16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 OPTCQ9UBM4 332 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 PCDHGA10Q9Y5H3 936 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 CSAG2Q9Y5P2 127 aa16.19■□□□□ 0.18
SFSWAP-205ENST00000537164 ITGAMP11215 1152 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 COL6A2P12110 1019 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 RNH1P13489 461 aaKnown RBP16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 HNF4AP41235 474 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 GLRBP48167 497 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 OLR1P78380 273 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 ABRAXAS2Q15018 415 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 PCBP2Q15366 365 aaKnown RBP eCLIP16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 NSDHLQ15738 373 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 TECRLQ5HYJ1 363 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 H3F3CQ6NXT2 135 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 KLC3Q6P597 504 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 TRMT10CQ7L0Y3 403 aaKnown RBP16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 TAOK1Q7L7X3 1001 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 ATCAYQ86WG3 371 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 LAS2Q8IYD9 372 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 PLD6Q8N2A8 252 aaKnown RBP16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 EFCAB3Q8N7B9 438 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 HAS2Q92819 552 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 QRFPRQ96P65 431 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 TXLNGYQ9BZA5 131 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 REXO4Q9GZR2 422 aaKnown RBP16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 RNF32Q9H0A6 362 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 TSC22D4Q9Y3Q8 395 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 IKBKGQ9Y6K9 419 aa16.18■□□□□ 0.18
SFSWAP-205ENST00000537164 HECTD1Q9ULT8 2610 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 IGKV3D-11A0A0A0MRZ8 115 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 ERI3O43414 337 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 CDC123O75794 336 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 SEC24DO94855 1032 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 ZIC2O95409 532 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 CELA2AP08217 269 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 EPB42P16452 691 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms