RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 SDHCQ99643 169 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-208ENST00000537047 POLLQ9UGP5 575 aa3.38□□□□□ -1.87
CCDC7-208ENST00000537047 SLC12A6Q9UHW9 1150 aa3.38□□□□□ -1.87
CCDC7-208ENST00000537047 SPATA2Q9UM82 520 aa3.38□□□□□ -1.87
CCDC7-208ENST00000537047 TRBV5-4A0A0C4DH59 114 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 hCG_1809904A0A1W2PP81 198 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 A0A1W2PPE2 198 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 A0A1W2PR64 198 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 KBTBD11O94819 623 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 PGM3O95394 542 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 YES1P07947 543 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 FCGR2BP31994 310 aaPredicted RBP3.37□□□□□ -1.87
CCDC7-208ENST00000537047 FCGR2CP31995 323 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 PCGF2P35227 344 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 GCKRQ14397 625 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 NAA16Q6N069 864 aaPredicted RBP3.37□□□□□ -1.87
CCDC7-208ENST00000537047 DHRS11Q6UWP2 260 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 IGFL2Q6UWQ7 119 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 PGM2Q96G03 612 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 TNFRSF13CQ96RJ3 184 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 NUDT16L1Q9BRJ7 211 aaKnown RBP3.37□□□□□ -1.87
CCDC7-208ENST00000537047 DEFB126Q9BYW3 111 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 MAF1Q9H063 256 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 KCNK13Q9HB14 408 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 PLSCR3Q9NRY6 295 aa3.37□□□□□ -1.87
CCDC7-208ENST00000537047 EDDM13A0A1B0GTR0 161 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 NKX6-3A6NJ46 265 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 ADAM20O43506 726 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 KIF5CO60282 957 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 CELF2O95319 508 aaKnown RBP3.36□□□□□ -1.87
CCDC7-208ENST00000537047 IGHG1P01857 330 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 IGHG3P01860 377 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 STAG3L1P0CL83 205 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 ELK1P19419 428 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 FEN1P39748 380 aaKnown RBP3.36□□□□□ -1.87
CCDC7-208ENST00000537047 CACNG1Q06432 222 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 CCL14Q16627 93 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 BMP2KLQ5H9B9 411 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 TEX35Q5T0J7 233 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 CFAP58Q5T655 872 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 TTC27Q6P3X3 843 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 Q6ZVQ6 151 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 POMGNT2Q8NAT1 580 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 LURAP1Q96LR2 239 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 FNDC4Q9H6D8 234 aaPredicted RBP3.36□□□□□ -1.87
CCDC7-208ENST00000537047 ASB8Q9H765 288 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 PIH1D3Q9NQM4 214 aaKnown RBP3.36□□□□□ -1.87
CCDC7-208ENST00000537047 RSPH14Q9UHP6 348 aa3.36□□□□□ -1.87
CCDC7-208ENST00000537047 MAGED1Q9Y5V3 778 aaPredicted RBP3.36□□□□□ -1.87
CCDC7-208ENST00000537047 TEX48A0A1B0GUV7 120 aa3.35□□□□□ -1.87
CCDC7-208ENST00000537047 WI2-2373I1.2A0A1W2PRP0 233 aa3.35□□□□□ -1.87
CCDC7-208ENST00000537047 HOXC4P09017 264 aaPredicted RBP3.35□□□□□ -1.87
CCDC7-208ENST00000537047 OR52Z1P0C646 297 aa3.35□□□□□ -1.87
CCDC7-208ENST00000537047 EEF1B2P24534 225 aaKnown RBP3.35□□□□□ -1.87
CCDC7-208ENST00000537047 CLDN17P56750 224 aa3.35□□□□□ -1.87
CCDC7-208ENST00000537047 ACSM1Q08AH1 577 aa3.35□□□□□ -1.87
CCDC7-208ENST00000537047 MUC21Q5SSG8 566 aa3.35□□□□□ -1.87
CCDC7-208ENST00000537047 WDR78Q5VTH9 848 aa3.35□□□□□ -1.87
CCDC7-208ENST00000537047 GPR139Q6DWJ6 353 aa3.35□□□□□ -1.87
CCDC7-208ENST00000537047 CGB2Q6NT52 195 aa3.35□□□□□ -1.87
CCDC7-208ENST00000537047 Q71RC1 249 aaPredicted RBP3.35□□□□□ -1.87
CCDC7-208ENST00000537047 BANPQ8N9N5 519 aa3.35□□□□□ -1.87
CCDC7-208ENST00000537047 CCDC63Q8NA47 563 aa3.35□□□□□ -1.87
CCDC7-208ENST00000537047 PPP1R16AQ96I34 528 aa3.35□□□□□ -1.87
CCDC7-208ENST00000537047 HEG1Q9ULI3 1381 aa3.35□□□□□ -1.87
CCDC7-208ENST00000537047 LOC390937A0A1W2PQ73 354 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 LMO7DNF2Z398 122 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 AHCYL1O43865 530 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 TADA2AO75478 443 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 PIGRP01833 764 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 CRYBA2P53672 197 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 NAAAQ02083 359 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 CALD1Q05682 793 aaKnown RBP3.34□□□□□ -1.87
CCDC7-208ENST00000537047 RBBP7Q16576 425 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 KRT39Q6A163 491 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 ADGRD2Q7Z7M1 963 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 TLK2Q86UE8 772 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 TEX26Q8N6G2 289 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 OR1B1Q8NGR6 318 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 ZNF275Q9NSD4 429 aaPredicted RBP3.34□□□□□ -1.87
CCDC7-208ENST00000537047 PKD2L2Q9NZM6 624 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 MORF4L1Q9UBU8 362 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 CLEC4EQ9ULY5 219 aa3.34□□□□□ -1.87
CCDC7-208ENST00000537047 MRPL11Q9Y3B7 192 aaKnown RBP3.34□□□□□ -1.87
CCDC7-208ENST00000537047 TCRBV21S2A2A0A5A6 115 aa3.33□□□□□ -1.88
CCDC7-208ENST00000537047 IGLON5A6NGN9 336 aa3.33□□□□□ -1.88
CCDC7-208ENST00000537047 MLNRO43193 412 aa3.33□□□□□ -1.88
CCDC7-208ENST00000537047 TSC22D2O75157 780 aa3.33□□□□□ -1.88
CCDC7-208ENST00000537047 MT-ND2P03891 347 aa3.33□□□□□ -1.88
CCDC7-208ENST00000537047 MC5RP33032 325 aa3.33□□□□□ -1.88
CCDC7-208ENST00000537047 CSE1LP55060 971 aaKnown RBP3.33□□□□□ -1.88
CCDC7-208ENST00000537047 BRINP3Q76B58 766 aa3.33□□□□□ -1.88
CCDC7-208ENST00000537047 POGLUT1Q8NBL1 392 aa3.33□□□□□ -1.88
CCDC7-208ENST00000537047 U2AF1L4Q8WU68 220 aaKnown RBP3.33□□□□□ -1.88
CCDC7-208ENST00000537047 LIME1Q9H400 295 aa3.33□□□□□ -1.88
CCDC7-208ENST00000537047 THYN1Q9P016 225 aa3.33□□□□□ -1.88
CCDC7-208ENST00000537047 ANAPC2Q9UJX6 822 aa3.33□□□□□ -1.88
CCDC7-208ENST00000537047 TRPV2Q9Y5S1 764 aa3.33□□□□□ -1.88
CCDC7-208ENST00000537047 FAM169AQ9Y6X4 670 aa3.33□□□□□ -1.88
CCDC7-208ENST00000537047 SYNDIG1LA6NDD5 238 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms